Pairwise Alignments
Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 138 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ
Score = 63.9 bits (154), Expect = 3e-15
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 15 CEDCKNKEISKCMEVCPTNAIKMIDGKAFSCITC--GTCAKECPTGAIKKNEYGGYYVNR 72
C DCK KC CP NAI + DG C+ C C CP AI+K V+
Sbjct: 10 CVDCK-----KCERACPINAIHVFDGIPIRCMHCEDAPCLNVCPEDAIEKIA-DKVVVHP 63
Query: 73 KLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCG--LCTTECPYNARLYFDPSSLK 130
+ C GC +C VCP+ I I + T + C+ G +C CP A Y++ ++++
Sbjct: 64 EKCVGCALCAEVCPVGAIQI-DRCTKVAVKCDGCIERGSEVCLEVCPTKALDYYE-NTIE 121
Query: 131 NTKNKML 137
N + +++
Sbjct: 122 NKRAELV 128
Score = 60.1 bits (144), Expect = 4e-14
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 34/144 (23%)
Query: 202 VDGCTRCNICNEVCPVDAIE-YGQVTENCILCGN--CISKCPKDVLEISEFKVVKTKEDV 258
+D C C C CP++AI + + C+ C + C++ CP+D +E K + V
Sbjct: 7 IDLCVDCKKCERACPINAIHVFDGIPIRCMHCEDAPCLNVCPEDAIE-------KIADKV 59
Query: 259 KAKPEKHCINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECPQGVRINKGEFVD 318
PEK C+ C LC + CP A++ + K C+ C I +G
Sbjct: 60 VVHPEK-CVGCALCAEVCPVGAIQIDR-----CTKVAVKCDGC---------IERGS--- 101
Query: 319 GGCVLCELCIKECPEDAISIKERS 342
E+C++ CP A+ E +
Sbjct: 102 ------EVCLEVCPTKALDYYENT 119
Score = 55.8 bits (133), Expect = 8e-13
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 33/139 (23%)
Query: 352 CIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEK--CAIHCPRDVIENT 409
C+ C C CP +AI V F G + C+ CE C CP D IE
Sbjct: 10 CVDCKKCERACPINAIHV------FDGIPIR--------CMHCEDAPCLNVCPEDAIE-- 53
Query: 410 SGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAI--DKGEINTEKCEYC-----SACV 462
K+ D+ + + CV C LC +CP AI D+ KC+ C C+
Sbjct: 54 ----KIADK----VVVHPEKCVGCALCAEVCPVGAIQIDRCTKVAVKCDGCIERGSEVCL 105
Query: 463 NICPTRAIRIYRTWNEKTK 481
+CPT+A+ Y E +
Sbjct: 106 EVCPTKALDYYENTIENKR 124
Score = 51.6 bits (122), Expect = 2e-11
Identities = 40/121 (33%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 181 CVECGKCIYLCPKDTIIEAEMVDG----CTRCN--ICNEVCPVDAIE--YGQVT---ENC 229
CV+C KC CP + I + DG C C C VCP DAIE +V E C
Sbjct: 10 CVDCKKCERACPINAI---HVFDGIPIRCMHCEDAPCLNVCPEDAIEKIADKVVVHPEKC 66
Query: 230 ILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCG--LCVDKCPSNALRFENGK 287
+ C C CP ++I V K D CI G +C++ CP+ AL +
Sbjct: 67 VGCALCAEVCPVGAIQIDRCTKVAVKCD-------GCIERGSEVCLEVCPTKALDYYENT 119
Query: 288 I 288
I
Sbjct: 120 I 120
Score = 51.2 bits (121), Expect = 2e-11
Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 25/138 (18%)
Query: 287 KILYDPKTCTLCNTCVKECPQGVRINKGEFVDG---GCVLCE--LCIKECPEDAISIKER 341
K++ + C C C + CP IN DG C+ CE C+ CPEDAI K
Sbjct: 2 KVMPNIDLCVDCKKCERACP----INAIHVFDGIPIRCMHCEDAPCLNVCPEDAIE-KIA 56
Query: 342 SKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVI--CEKCAI 399
K + E+C+ C C+ VCP AI + ++ + D C+ E C
Sbjct: 57 DKVV-VHPEKCVGCALCAEVCPVGAIQI---------DRCTKVAVKCDGCIERGSEVCLE 106
Query: 400 HCPR---DVIENTSGHKK 414
CP D ENT +K+
Sbjct: 107 VCPTKALDYYENTIENKR 124
Score = 50.8 bits (120), Expect = 3e-11
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 180 KCVEC--GKCIYLCPKDTIIE-AEMV----DGCTRCNICNEVCPVDAIEYGQVTENCILC 232
+C+ C C+ +CP+D I + A+ V + C C +C EVCPV AI+ + T+ + C
Sbjct: 34 RCMHCEDAPCLNVCPEDAIEKIADKVVVHPEKCVGCALCAEVCPVGAIQIDRCTKVAVKC 93
Query: 233 GNCISK--------CPKDVLEISEFKVVKTKEDVKAKPEK 264
CI + CP L+ E + + ++ +K +K
Sbjct: 94 DGCIERGSEVCLEVCPTKALDYYENTIENKRAELVSKLKK 133
Score = 49.7 bits (117), Expect = 6e-11
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 20/92 (21%)
Query: 389 DNCVICEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKC--GLCTIICPNDAI- 445
D CV C+KC CP + I G IR C+ C C +CP DAI
Sbjct: 8 DLCVDCKKCERACPINAIHVFDGIP---------IR-----CMHCEDAPCLNVCPEDAIE 53
Query: 446 ---DKGEINTEKCEYCSACVNICPTRAIRIYR 474
DK ++ EKC C+ C +CP AI+I R
Sbjct: 54 KIADKVVVHPEKCVGCALCAEVCPVGAIQIDR 85
Score = 41.6 bits (96), Expect = 2e-08
Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 35/134 (26%)
Query: 105 MCVMCGLCTTECPYNARLYFDPSSLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVK 164
+CV C C CP NA FD ++ + P +
Sbjct: 9 LCVDCKKCERACPINAIHVFDGIPIRCMHCE-------------------DAPCLNVCPE 49
Query: 165 PAERKLRHSISIDSKKCVECGKCIYLCPKDTIIEAEMVDGCTR------------CNICN 212
A K+ + + +KCV C C +CP + A +D CT+ +C
Sbjct: 50 DAIEKIADKVVVHPEKCVGCALCAEVCP----VGAIQIDRCTKVAVKCDGCIERGSEVCL 105
Query: 213 EVCPVDAIEYGQVT 226
EVCP A++Y + T
Sbjct: 106 EVCPTKALDYYENT 119
Score = 27.7 bits (60), Expect = 2e-04
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 14 ECEDCKNKEISKCMEVCPTNAI 35
+C+ C + C+EVCPT A+
Sbjct: 92 KCDGCIERGSEVCLEVCPTKAL 113