Pairwise Alignments

Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., 4Fe-4S ferredoxin from Klebsiella michiganensis M5al

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 37/153 (24%)

Query: 342 SKFTSIDKEECIACGTCSMVC----PNDAITVVIDSLNFSGNKVHSKVIFNDN------C 391
           ++F   D E+CI C TC + C      D     + +  F+      +V+ ND       C
Sbjct: 2   NRFILADAEKCIGCRTCEVACVVSHQQDQDCSGVSAARFAPR---IRVVKNDELSTATLC 58

Query: 392 VICEK--CAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDA----- 444
             CE   CA  CP   I           RENS  R D   C+ C  C + CP  A     
Sbjct: 59  RQCEDAPCANVCPEGAIR----------RENSVWRVDQRRCIGCKSCMVACPYGAMTVMR 108

Query: 445 IDKGEINTEKCEYCS------ACVNICPTRAIR 471
           +++G +   KC+ CS      ACV  CPT+A+R
Sbjct: 109 VEEG-VQALKCDLCSHRDEGPACVAACPTQALR 140



 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 24/146 (16%)

Query: 227 ENCILCGNCISKC------PKDVLEIS------EFKVVKTKEDVKAKPEKHCINCGLCVD 274
           E CI C  C   C       +D   +S        +VVK  E   A   + C +   C +
Sbjct: 10  EKCIGCRTCEVACVVSHQQDQDCSGVSAARFAPRIRVVKNDELSTATLCRQCEDAP-CAN 68

Query: 275 KCPSNALRFENGKILYDPKTCTLCNTCVKECPQG----VRINKGEFVDGGCVLCE----- 325
            CP  A+R EN     D + C  C +C+  CP G    +R+ +G      C LC      
Sbjct: 69  VCPEGAIRRENSVWRVDQRRCIGCKSCMVACPYGAMTVMRVEEG-VQALKCDLCSHRDEG 127

Query: 326 -LCIKECPEDAISIKERSKFTSIDKE 350
             C+  CP  A+   E  +   I  E
Sbjct: 128 PACVAACPTQALRCMEPMELERIAAE 153



 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 24/108 (22%)

Query: 285 NGKILYDPKTCTLCNTCVKECPQG------------------VRINKGEFVDGG--CVLC 324
           N  IL D + C  C TC   C                     +R+ K + +     C  C
Sbjct: 2   NRFILADAEKCIGCRTCEVACVVSHQQDQDCSGVSAARFAPRIRVVKNDELSTATLCRQC 61

Query: 325 E--LCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVV 370
           E   C   CPE AI  +  +    +D+  CI C +C + CP  A+TV+
Sbjct: 62  EDAPCANVCPEGAI--RRENSVWRVDQRRCIGCKSCMVACPYGAMTVM 107



 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 21/147 (14%)

Query: 2   IVTDIKKCRTYEECEDC---KNKEISKCMEVCPTN---AIKMIDGKAFS----CITC--G 49
           I+ D +KC     CE      +++   C  V        I+++     S    C  C   
Sbjct: 5   ILADAEKCIGCRTCEVACVVSHQQDQDCSGVSAARFAPRIRVVKNDELSTATLCRQCEDA 64

Query: 50  TCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMC 109
            CA  CP GAI++ E   + V+++ C GC  C   CP   + +     G       C +C
Sbjct: 65  PCANVCPEGAIRR-ENSVWRVDQRRCIGCKSCMVACPYGAMTVMRVEEG--VQALKCDLC 121

Query: 110 G------LCTTECPYNARLYFDPSSLK 130
                   C   CP  A    +P  L+
Sbjct: 122 SHRDEGPACVAACPTQALRCMEPMELE 148



 Score = 30.4 bits (67), Expect = 4e-05
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 11/56 (19%)

Query: 176 IDSKKCVECGKCIYLCPKD--TIIEAEMVDGCTRCNICNE---------VCPVDAI 220
           +D ++C+ C  C+  CP    T++  E      +C++C+           CP  A+
Sbjct: 84  VDQRRCIGCKSCMVACPYGAMTVMRVEEGVQALKCDLCSHRDEGPACVAACPTQAL 139