Pairwise Alignments
Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 162 a.a., iron-sulfur cluster-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 66.6 bits (161), Expect = 5e-16
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 45 CITC--GTCAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGKSYP 102
C+ C CA+ CPTGA + + GG V+R LC CG C CP+D + + + TG Y
Sbjct: 46 CLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHM-DGETGLPY- 103
Query: 103 TGMCVMCGLCTTECPY 118
+C+ CG C CP+
Sbjct: 104 --VCIHCGRCVAFCPH 117
Score = 51.6 bits (122), Expect = 2e-11
Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 350 EECIACGTCSMVCP---NDAITVVIDSLNFSGNKVHSKVIFNDNCVICEK--CAIHCPRD 404
E CI C CS+ C + ++ V + + S C+ C+ CA CP
Sbjct: 2 ERCIGCHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTG 61
Query: 405 VIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAID-KGEINTE-KCEYCSACV 462
R+ ++ D C++CG C CP DA+ GE C +C CV
Sbjct: 62 AY---------AQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGLPYVCIHCGRCV 112
Query: 463 NICPTRAIRI 472
CP I +
Sbjct: 113 AFCPHECIEL 122
Score = 49.7 bits (117), Expect = 7e-11
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Query: 173 SISIDSKKCVEC--GKCIYLCPKDTIIEAE----MVDG--CTRCNICNEVCPVDAIEYGQ 224
S +++ C+ C C CP + + VD C RC C E CPVDA+
Sbjct: 38 STGFEARLCLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDG 97
Query: 225 VT---ENCILCGNCISKCPKDVLEISEFKVVKTKED 257
T CI CG C++ CP + +E+ + V D
Sbjct: 98 ETGLPYVCIHCGRCVAFCPHECIELVDQPVADAASD 133
Score = 47.0 bits (110), Expect = 5e-10
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 31/131 (23%)
Query: 295 CTLCNTCVKECPQ-----------GVRINKGEFVDGG-----CVLCEL--CIKECPEDAI 336
C C+ C C + G+RI + G C+ C+ C + CP A
Sbjct: 4 CIGCHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTGAY 63
Query: 337 SIKERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEK 396
+ + + +D+ CI CG C+ CP +D+++ G V C+ C +
Sbjct: 64 A-QRKGGGVKVDRSLCIRCGRCAEACP-------VDAVHMDGETGLPYV-----CIHCGR 110
Query: 397 CAIHCPRDVIE 407
C CP + IE
Sbjct: 111 CVAFCPHECIE 121
Score = 46.6 bits (109), Expect = 6e-10
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 290 YDPKTCTLCNT--CVKECPQGV---RINKGEFVDGG-CVLCELCIKECPEDAISIKERSK 343
++ + C C+ C + CP G R G VD C+ C C + CP DA+ + +
Sbjct: 41 FEARLCLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETG 100
Query: 344 FTSIDKEECIACGTCSMVCPNDAITVV 370
+ CI CG C CP++ I +V
Sbjct: 101 LPYV----CIHCGRCVAFCPHECIELV 123
Score = 46.2 bits (108), Expect = 8e-10
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 10/85 (11%)
Query: 14 ECEDCKNKEISKCMEVCPTNAIKMIDGKAFS-----CITCGTCAKECPTGAIKKN-EYGG 67
E C + + C + CPT A G CI CG CA+ CP A+ + E G
Sbjct: 42 EARLCLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGL 101
Query: 68 YYVNRKLCTGCGICKNVCPIDIIDI 92
YV C CG C CP + I++
Sbjct: 102 PYV----CIHCGRCVAFCPHECIEL 122
Score = 41.2 bits (95), Expect = 2e-08
Identities = 30/130 (23%), Positives = 43/130 (33%), Gaps = 17/130 (13%)
Query: 179 KKCVECGKCIYLCPKDTIIEAEMVDGCTRCNICNEVCPVDAIEYGQVTENCILC--GNCI 236
++C+ C C C + V R + + G C+ C C
Sbjct: 2 ERCIGCHACSLACARLVHKRLSWVTAGIR------ITSAGGLSTGFEARLCLACDPAPCA 55
Query: 237 SKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRFENGKILYDPKTCT 296
CP + VK + CI CG C + CP +A+ + L P C
Sbjct: 56 QACPTGAYAQRKGGGVKVDRSL-------CIRCGRCAEACPVDAVHMDGETGL--PYVCI 106
Query: 297 LCNTCVKECP 306
C CV CP
Sbjct: 107 HCGRCVAFCP 116
Score = 39.7 bits (91), Expect = 7e-08
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 227 ENCILCGNCISKCPKDVLE-----ISEFKVVKTKEDVKAKPEKHCINC--GLCVDKCPSN 279
E CI C C C + V + + ++ + C+ C C CP+
Sbjct: 2 ERCIGCHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTG 61
Query: 280 AL-RFENGKILYDPKTCTLCNTCVKECP-QGVRINKGEFVDGGCVLCELCIKECPEDAIS 337
A + + G + D C C C + CP V ++ + C+ C C+ CP + I
Sbjct: 62 AYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMDGETGLPYVCIHCGRCVAFCPHECIE 121
Query: 338 IKER 341
+ ++
Sbjct: 122 LVDQ 125
Score = 36.6 bits (83), Expect = 6e-07
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 18/85 (21%)
Query: 205 CTRCNI--CNEVCPVDAIEY---GQVTEN---CILCGNCISKCPKDVLEISEFKVVKTKE 256
C C+ C + CP A G V + CI CG C CP D + +
Sbjct: 46 CLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHM---------- 95
Query: 257 DVKAKPEKHCINCGLCVDKCPSNAL 281
D + CI+CG CV CP +
Sbjct: 96 DGETGLPYVCIHCGRCVAFCPHECI 120
Score = 36.2 bits (82), Expect = 8e-07
Identities = 24/90 (26%), Positives = 31/90 (34%), Gaps = 15/90 (16%)
Query: 45 CITCGTCAKECP----------TGAIKKNEYGGYYVN--RKLCTGC--GICKNVCPIDII 90
CI C C+ C T I+ GG +LC C C CP
Sbjct: 4 CIGCHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTGAY 63
Query: 91 DIREDSTGKSYPTGMCVMCGLCTTECPYNA 120
R+ G +C+ CG C CP +A
Sbjct: 64 AQRKGG-GVKVDRSLCIRCGRCAEACPVDA 92