Pairwise Alignments
Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 553 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella sp. ANA-3
Score = 54.3 bits (129), Expect = 1e-11
Identities = 72/316 (22%), Positives = 123/316 (38%), Gaps = 51/316 (16%)
Query: 24 SKCMEVCPTNAI----KMIDGKAFSCITCGTCAKECPTGAI--------KKNEYGGYYVN 71
++C+ CP +AI K I+ + C G+CA CPTGAI + Y +N
Sbjct: 196 NRCLNFCPADAISSVAKKIEVDPYLCHGAGSCASACPTGAIGYDLPTPQALHSYLNKIIN 255
Query: 72 R---KLCTGCGICKNVCPIDIIDIREDSTGKSYPTGM----CVMCGLCTTECPYNAR--L 122
R + T I + + I +D G P + + AR L
Sbjct: 256 RYREQAQTAPVILFHDNAVGASLIGDDLAGDVLPVALEEITVASIDHWLAALAWGARQVL 315
Query: 123 YFDPSSLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPA---ERKLRHSISIDSK 179
+ + T +ML + M+ E +P+ + ++ P+ + IS+D
Sbjct: 316 ILNTEATAPTLTQMLKGELALANSMLD---EIGQPQRLSLIDPSMLTNLEPLLDISLDWP 372
Query: 180 KCVECGKCIYLCPKDTIIEAEMVDGC-TRCNICNEVCPVDAIEYGQVT---ENCILCGNC 235
V G ++T+ +A +D ++ N ++ + YG+V+ E C LC +C
Sbjct: 373 VIVP-GAFAPTTKRNTLFDA--IDHLNSQAGEINSSLSINNVPYGKVSVNVEKCTLCMSC 429
Query: 236 ISKCPKDVLEISEFKVVKTKEDVKAKP-----EKHCINCGLCVDKCPSNALRFENGKILY 290
++ CP L+ D KP E++C+ CGLC CP + +I +
Sbjct: 430 VAICPTMALQ-----------DGGDKPALHFIEQNCVQCGLCEAACPEKVISL-TPQINF 477
Query: 291 DPKTCTLCNTCVKECP 306
D T +E P
Sbjct: 478 DKAARQQLQTLKEEAP 493
Score = 52.4 bits (124), Expect = 4e-11
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 23/107 (21%)
Query: 267 INCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECPQGVRINKGE-----FVDGGC 321
IN L ++ P GK+ + + CTLC +CV CP + G+ F++ C
Sbjct: 402 INSSLSINNVPY-------GKVSVNVEKCTLCMSCVAICPTMALQDGGDKPALHFIEQNC 454
Query: 322 VLCELCIKECPEDAISIKERSKFTSIDKE-----------ECIACGT 357
V C LC CPE IS+ + F ++ ECI CG+
Sbjct: 455 VQCGLCEAACPEKVISLTPQINFDKAARQQLQTLKEEAPFECIRCGS 501
Score = 44.7 bits (104), Expect = 8e-09
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 202 VDGCTRCNICNEVCPVDAIEYGQ-------VTENCILCGNCISKCPKDVL----EISEFK 250
V+ CT C C +CP A++ G + +NC+ CG C + CP+ V+ +I+ K
Sbjct: 420 VEKCTLCMSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACPEKVISLTPQINFDK 479
Query: 251 VVKTK-EDVKAKPEKHCINCG 270
+ + + +K + CI CG
Sbjct: 480 AARQQLQTLKEEAPFECIRCG 500
Score = 41.2 bits (95), Expect = 9e-08
Identities = 69/338 (20%), Positives = 118/338 (34%), Gaps = 65/338 (19%)
Query: 153 EFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCIYLCPKDTIIEAEM---VDG--CTR 207
+F +P++VKI R+ I+ C +C+ CP D I VD C
Sbjct: 171 QFDKPRYVKINADLCAHDRNGIN-------GCNRCLNFCPADAISSVAKKIEVDPYLCHG 223
Query: 208 CNICNEVCPVDAIEYGQVTENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCI 267
C CP AI Y T + + ++K E ++ V D + +
Sbjct: 224 AGSCASACPTGAIGYDLPTPQAL--HSYLNKIINRYREQAQTAPVILFHD-------NAV 274
Query: 268 NCGLCVDKCPSNALRFENGKIL------------YDPKTCTLCNTCVKECPQGVRINKGE 315
L D + L +I + + + NT P ++ KGE
Sbjct: 275 GASLIGDDLAGDVLPVALEEITVASIDHWLAALAWGARQVLILNT-EATAPTLTQMLKGE 333
Query: 316 FVDGGCVLCELCIKECPEDAISIKERSKFTSIDKE-------ECIACGTCSMVCPNDAIT 368
+L E+ + +S+ + S T+++ I G + + +
Sbjct: 334 LALANSMLDEIGQPQ----RLSLIDPSMLTNLEPLLDISLDWPVIVPGAFAPTTKRNTLF 389
Query: 369 VVIDSLNFSGNKVHSKVIFN-----------DNCVICEKCAIHCPRDVIENTSGHKKVVD 417
ID LN +++S + N + C +C C CP +++ D
Sbjct: 390 DAIDHLNSQAGEINSSLSINNVPYGKVSVNVEKCTLCMSCVAICPTMALQDGG------D 443
Query: 418 RENSYIRTDNDYCVKCGLCTIICPNDAID-KGEINTEK 454
+ + N CV+CGLC CP I +IN +K
Sbjct: 444 KPALHFIEQN--CVQCGLCEAACPEKVISLTPQINFDK 479
Score = 40.4 bits (93), Expect = 2e-07
Identities = 22/87 (25%), Positives = 38/87 (43%)
Query: 222 YGQVTENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNAL 281
Y V ++ + + + P+ V + + + VK D+ A C C++ CP++A+
Sbjct: 148 YFYVGQDDAKLADALEQLPELVGQFDKPRYVKINADLCAHDRNGINGCNRCLNFCPADAI 207
Query: 282 RFENGKILYDPKTCTLCNTCVKECPQG 308
KI DP C +C CP G
Sbjct: 208 SSVAKKIEVDPYLCHGAGSCASACPTG 234
Score = 38.9 bits (89), Expect = 5e-07
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 11/92 (11%)
Query: 346 SIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEKCAIHCPRDV 405
S++ E+C C +C +CP A+ G + NCV C C CP V
Sbjct: 417 SVNVEKCTLCMSCVAICPTMALQ--------DGGDKPALHFIEQNCVQCGLCEAACPEKV 468
Query: 406 IENTS--GHKKVVDRENSYIRTDNDY-CVKCG 434
I T K ++ ++ + + C++CG
Sbjct: 469 ISLTPQINFDKAARQQLQTLKEEAPFECIRCG 500
Score = 35.0 bits (79), Expect = 7e-06
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 447 KGEINTEKCEYCSACVNICPTRAIR 471
K +N EKC C +CV ICPT A++
Sbjct: 415 KVSVNVEKCTLCMSCVAICPTMALQ 439
Score = 31.2 bits (69), Expect = 9e-05
Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 70 VNRKLCT-------GCGICKNVCPIDIIDIREDSTGKSYPTG--MCVMCGLCTTECPYNA 120
+N LC GC C N CP D I S K +C G C + CP A
Sbjct: 180 INADLCAHDRNGINGCNRCLNFCPADAI----SSVAKKIEVDPYLCHGAGSCASACPTGA 235
Query: 121 RLYF--DPSSLKNTKNKML 137
Y P +L + NK++
Sbjct: 236 IGYDLPTPQALHSYLNKII 254
Score = 30.8 bits (68), Expect = 1e-04
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 6/49 (12%)
Query: 430 CVKCGLCTIICPNDAIDKG------EINTEKCEYCSACVNICPTRAIRI 472
C C C ICP A+ G + C C C CP + I +
Sbjct: 423 CTLCMSCVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACPEKVISL 471
Score = 30.0 bits (66), Expect = 2e-04
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
Query: 13 EECEDCKNKEISKCMEVCPTNAIKMIDGKAF------SCITCGTCAKECPTGAI 60
E+C C + C+ +CPT A++ K +C+ CG C CP I
Sbjct: 421 EKCTLCMS-----CVAICPTMALQDGGDKPALHFIEQNCVQCGLCEAACPEKVI 469