Pairwise Alignments

Query, 147 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 185 a.a., NADH dehydrogenase (ubiquinone), 20 kDa subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 87.4 bits (215), Expect = 1e-22
 Identities = 42/127 (33%), Positives = 77/127 (60%), Gaps = 8/127 (6%)

Query: 18  TGGCNGCDIEVVNCVLSPFYDAEQYNVFLTWNPREADVLVVTGCVTKAVSASLKKIYDEI 77
           T G   C +E+++C  +  YD +++      +PR++DV++V G +T  ++ +L+K+YD++
Sbjct: 59  TFGLACCALEMIHCACAR-YDLDRFGTVFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQM 117

Query: 78  PEPKAVVAAGACALMGGVYNNIGADLGTSTFIDGPVENIIPVDVKVPGCPPRPEDVITGI 137
            EP+ V++ G+CA  GG Y+        S  +    + I+PVD+ VPGCPP  E ++ G+
Sbjct: 118 AEPRWVISMGSCANGGGYYH-------YSYSVVRGCDRIVPVDIYVPGCPPTSEALLYGV 170

Query: 138 VKALPKI 144
           ++   KI
Sbjct: 171 LQLQKKI 177