Pairwise Alignments

Query, 147 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 142 a.a., NADH ubiquinone oxidoreductase, 20 kDa subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  118 bits (295), Expect = 4e-32
 Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 7/134 (5%)

Query: 8   KKNIHVMLVYTGGCNGCDIEVVNCVLSPFYDAEQYNVFLTWNPREADVLVVTGCVTKAVS 67
           KK+  +  +  G CNGCD+E+      P YD E+       +P+ AD+++VTG +T  V 
Sbjct: 9   KKSPWLYRINAGSCNGCDVELATTACIPRYDVERLGCQYCGSPKHADIVLVTGPLTARVK 68

Query: 68  ASLKKIYDEIPEPKAVVAAGACALMGGVYNNIGADLGTSTFIDGPVENIIPVDVKVPGCP 127
             + ++Y+EIP+PK  VA G C + GGV+         S  I GP++  +PVDV VPGCP
Sbjct: 69  DKVLRVYEEIPDPKVTVAIGVCPISGGVFRE-------SYSIVGPIDRYLPVDVNVPGCP 121

Query: 128 PRPEDVITGIVKAL 141
           PRP+ +I GI KA+
Sbjct: 122 PRPQAIIEGIAKAI 135