Pairwise Alignments

Query, 147 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 208 a.a., NADH-quinone oxidoreductase subunit B from Rhodopseudomonas palustris CGA009

 Score = 90.9 bits (224), Expect = 1e-23
 Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 10/138 (7%)

Query: 2   LKELSRKKNIHVMLVYTGGCNGCDIEVVNCVLSPFYDAEQYNV-FLTWNPREADVLVVTG 60
           L++L+     H +  +  G + C +E V  VL+P YD  ++    +  +PR+AD+LVV+G
Sbjct: 30  LEDLTAWSRKHSLWPFNFGLSCCYVEQVT-VLTPVYDQARFGAEVIRASPRQADLLVVSG 88

Query: 61  CVTKAVSASLKKIYDEIPEPKAVVAAGACALMGGVYNNIGADLGTSTFIDGPVENIIPVD 120
            V   ++A L ++Y+++  P+ V+A GACA  GG+Y+      G        V+  IPVD
Sbjct: 89  TVFHKMAAPLLRLYEQMRAPRWVIAMGACACSGGMYDIYSVVQG--------VDRFIPVD 140

Query: 121 VKVPGCPPRPEDVITGIV 138
           V +PGCPPRPE V+  ++
Sbjct: 141 VYIPGCPPRPEAVLDALI 158