Pairwise Alignments

Query, 331 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

Subject, 286 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis JJ

 Score = 56.2 bits (134), Expect = 9e-13
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 37/286 (12%)

Query: 22  LIAFAISTWIPGIQRKIQARIQQRKGPSISSPGFWAIFKYLYKEAKEPVSDLPKLFKFMP 81
           L AF +   + G  RKI ARIQ R GP I        FK+ +KE   P+S    L+ F+ 
Sbjct: 9   LYAFLVGGILLGFHRKIMARIQCRPGPPIIQYLIHT-FKFYFKELTFPISAGNPLYVFVA 67

Query: 82  LLSFIIVWMVLALTTVVHFHILSNEIGIIGLLKIEEMSYIIMGSLASTVMGIRMPFIDEC 141
           L+  ++VWM      VV    L   IG+  L KI E        L+S             
Sbjct: 68  LMD-VMVWMSALSIAVVFESSLLILIGLYILQKIVEHGC----GLSS------------- 109

Query: 142 KGSGYLKTIKITLGQLSAVRAFKMITVGSFPFYLATLLPFIPHKSIFLNNLIGNSFLFTL 201
            GS Y        G++  VR+         P + A  + +    S+ + ++I  ++    
Sbjct: 110 -GSPY--------GKVGGVRSV-FSAAAEVPLFAAAGIVYTVTHSLIIGDII--NYQAVN 157

Query: 202 GGLFGAL---AYIIGYIIMTKD--YPFSIMHTKADVIEGPTMEYSGKYRAFYLSVKELLM 256
           G L   L   A+ +  ++++K    PF+I+  K D+I G   E+ G   A  +    +  
Sbjct: 158 GPLIFQLPICAFAVFVLVLSKAPFSPFAIVKGK-DIISGYLTEHYGPLEAIIMIGDAIAW 216

Query: 257 ITLGSLFATLYLGIAPDILNPITIVMNFAVALVFPIISAVVSAYTP 302
             L  LF  L+LG        +T++  F + ++   I A+     P
Sbjct: 217 FVLLWLFMALFLGPLIVASPVLTLLGMFVLTIIISFICALTPLLAP 262