Pairwise Alignments

Query, 438 a.a., aspartate--tRNA(Asn) ligase from Methanococcus maripaludis S2

Subject, 500 a.a., Lysyl-tRNA synthetase (class II) from Pseudomonas stutzeri RCH2

 Score =  129 bits (325), Expect = 2e-34
 Identities = 123/471 (26%), Positives = 217/471 (46%), Gaps = 55/471 (11%)

Query: 6   DWRRTHYSKDVIPEM-DGQEVTLMGWVHSIRALGKLA-----FVILRDRAGTIQAVVPKQ 59
           D+RR  Y+ D+  +  +  +  L      ++  G++      F++L+D +G IQ  V ++
Sbjct: 39  DFRRDSYAGDLQKQYAEKTKEELEAAAIPVKVAGRIMLNRGPFMVLQDMSGRIQVYVDRK 98

Query: 60  KVDEETFEIAKKLGKEDIVAIKGKVVANEKAPKGFEVIPIEIRVLNKADAPLPLDPSEKV 119
            +  E  E  K     DI+A +G +  + K      V    +R+L K+  PLP    +K 
Sbjct: 99  TLPAEQVEAVKHFDLGDIIAAEGTLARSGKGD--LYVYMNSVRLLTKSLRPLP----DKF 152

Query: 120 SAEIDT--RLDKRFLDIR-RPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATE 176
               DT  R  +R++D+    +++  F++RS+++  IRK  A+  F+EV TP L      
Sbjct: 153 HGLTDTEQRYRQRYVDLMVNEEVRETFRVRSQVISHIRKFLAERHFLEVETPML--QTIP 210

Query: 177 GGTELFPI----SYFEKEAFLGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNE 232
           GG    P     +  +   FL  +P+LY + ++ GGF++VFEI + FR E  +TR H  E
Sbjct: 211 GGAAAKPFETHHNALDMPMFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTR-HNPE 269

Query: 233 AISIDSEMSFVNEKDAMAMLEKVVYNCY------SDIEYN-----------RPNEIE-LL 274
              ++   ++ + +D M + E++           +D+ Y            R +  + +L
Sbjct: 270 FTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVPYGDKVFHFGEPFARLSVFDSIL 329

Query: 275 ELNWEIPEKTFDKVTYTEAIDIAIAKGVEIEWGEDLSRAA----ERAVGDEMGGLYFITE 330
           + N EI     + V    AI  A   G ++   E L +      E  V  ++   +FITE
Sbjct: 330 KYNPEISADDLNDVEKARAI--AKKAGAKLLGHEGLGKLQVMIFEELVEHKLEQPHFITE 387

Query: 331 WPTQTRPFYTLPHKHDNKVCKAFDLMYKELEISSGAQRVHKYDLLVQNISNMGLNPDSFE 390
           +P +  P      ++ N V   F+L     EI++    ++  +   +       + D+ +
Sbjct: 388 YPFEVSPLARRNDRNPN-VTDRFELFIGGREIANAYSELNDAEDQAERFHAQVADKDAGD 446

Query: 391 T--------YLEAFKYGMPPHAGWGLGADRFAMVLTAQDNIRECVLFPRDR 433
                    ++ A +YGMPP AG G+G DR  M+LT   +IR+ +LFP  R
Sbjct: 447 DEAMHFDADFVRALEYGMPPTAGEGIGIDRLVMLLTNSPSIRDVILFPHMR 497