Pairwise Alignments

Query, 438 a.a., aspartate--tRNA(Asn) ligase from Methanococcus maripaludis S2

Subject, 599 a.a., aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data) from Synechococcus elongatus PCC 7942

 Score =  145 bits (367), Expect = 3e-39
 Identities = 103/299 (34%), Positives = 160/299 (53%), Gaps = 27/299 (9%)

Query: 9   RTHYSKDVIPEMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEI 68
           RTHY  ++  E  G  VTL GWV   R  G + FV LRDR GT+Q V   ++   E++  
Sbjct: 2   RTHYCGELRAEQVGTSVTLYGWVDRRRDHGGVIFVDLRDRTGTVQIVSDPERT-PESYHQ 60

Query: 69  AKKLGKEDIVAIKGKVVA------NEKAPKG-FEVIPIEIRVLNKADAPLPLDPS--EKV 119
           A+ L  E +V I G+V        N K P G  E+    I +LN     LP   S  ++ 
Sbjct: 61  AEGLRNEYVVKITGRVSGRPAESLNPKLPTGEVEIYADRIEILNAVRRQLPFQVSSADEE 120

Query: 120 SAEIDTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFAD-EGFIEVNTPKLVASATEGG 178
           +   D RL  R+LD+RR ++    ++R +++K+IR+   D E FIE+ TP L  S  EG 
Sbjct: 121 TVREDLRLRYRYLDLRRDRMNRNLQLRHQVVKAIRRFLEDEEQFIEIETPVLTKSTPEGA 180

Query: 179 TE-LFPISYFEKEAF-LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISI 236
            + L P      E F L QSPQL+KQ++M  GFD+ ++IA+ FR E+    R   E   +
Sbjct: 181 RDYLVPSRVNPGEWFALPQSPQLFKQLLMVSGFDRYYQIARCFRDEDLRADRQ-PEFTQL 239

Query: 237 DSEMSFVNEKDAMAMLEKVVYNCYSDIEYNRPNEIELLELNWEIPEKTFDKVTYTEAID 295
           D EMSF+++++ + + E+++ + +  ++              E+P + F ++TY EA+D
Sbjct: 240 DMEMSFLSQEEIIDLNERLIAHIFKTVK------------GIELP-RPFPRLTYAEAMD 285



 Score = 66.2 bits (160), Expect = 3e-15
 Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 4/88 (4%)

Query: 351 KAFDLMYKELEISSGAQRVHKYDLLVQNISNMGLNPDS----FETYLEAFKYGMPPHAGW 406
           +A+D++   LEI  G+ R+++ D+  +    +GL+ +     F   LEAF +G PPH G 
Sbjct: 478 QAYDIVLNGLEIGGGSLRIYQRDIQERVFETIGLSHEEAQAKFGFLLEAFDFGTPPHGGI 537

Query: 407 GLGADRFAMVLTAQDNIRECVLFPRDRQ 434
             G DR  M+LT +++IR+ + FP+ +Q
Sbjct: 538 AYGLDRLVMLLTGEESIRDAIAFPKTQQ 565