Pairwise Alignments

Query, 438 a.a., aspartate--tRNA(Asn) ligase from Methanococcus maripaludis S2

Subject, 591 a.a., aspartyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score =  140 bits (353), Expect = 1e-37
 Identities = 103/321 (32%), Positives = 162/321 (50%), Gaps = 25/321 (7%)

Query: 9   RTHYSKDVIPEMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEI 68
           R+HY  DV     GQEVTL+GWV+  R LG + F+ LRDR G +Q V      D   F++
Sbjct: 2   RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVIFLDLRDREGLVQVVYDPDLPD--VFDV 59

Query: 69  AKKLGKEDIVAIKGKV-------VANEKAPKGFEVIPIEIRVLNKADAPLPLDPSEKVSA 121
           A  L  E  V +KG V       V ++      EV+   + ++N AD PLPL      + 
Sbjct: 60  ASSLRAEFCVQVKGVVRPRPDSQVNSQMKTGEIEVLGKALTIINAAD-PLPLSLDNHQNN 118

Query: 122 EIDTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTE- 180
             + RL  R+LD+RRP++      R+++   +R+     GF+++ TP L  +  EG  + 
Sbjct: 119 SEEARLKYRYLDLRRPEMAQRLIFRAKVTSFVRRFMDGNGFLDIETPILTKATPEGARDY 178

Query: 181 LFPISYFEKEAF-LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSE 239
           L P   ++ + F L QSPQL+KQ++M  GFD+ ++I + FR E+    R   E   ID E
Sbjct: 179 LVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQ-PEFTQIDIE 237

Query: 240 MSFVNEKDAMAMLEKVVYNCYSDIEYNRPNEIELLELN-WEIPEKTFDKVTYTEAIDIA- 297
            SF+     M   E+++ N +          +EL+ ++  + P+ T+D+       D   
Sbjct: 238 TSFMTSDQVMETTERMIRNLF----------LELMNVDLGDFPKMTWDEAMRRFGSDKPD 287

Query: 298 IAKGVEIEWGEDLSRAAERAV 318
           +   +E+    DL +A E AV
Sbjct: 288 LRNPLELVDVADLLKAVEFAV 308



 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)

Query: 349 VCKAFDLMYKELEISSGAQRVHKYDLLVQNISNMGLNPDS----FETYLEAFKYGMPPHA 404
           V  A+D++   +E+  G+ R+H  D+       +G++ +     F   L+A ++G PPHA
Sbjct: 470 VSDAYDMVLNGVELGGGSVRIHNGDMQSTVFRILGIDDEEAKEKFGFLLDALRFGTPPHA 529

Query: 405 GWGLGADRFAMVLTAQDNIRECVLFPRDRQRLTP 438
           G   G DR  M++T   +IR+ + FP+      P
Sbjct: 530 GLAFGLDRLVMLMTGASSIRDVMAFPKTTTAACP 563