Pairwise Alignments

Query, 438 a.a., aspartate--tRNA(Asn) ligase from Methanococcus maripaludis S2

Subject, 592 a.a., aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) (from data) from Phaeobacter inhibens DSM 17395

 Score =  142 bits (359), Expect = 2e-38
 Identities = 97/286 (33%), Positives = 145/286 (50%), Gaps = 13/286 (4%)

Query: 9   RTHYSKDVIPEMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEI 68
           R+H   ++     G+ V L GWVH +R  G L F+ LRD  G  Q +      D   F  
Sbjct: 5   RSHTCAELNKSNVGETVRLSGWVHRVRDHGGLLFIDLRDHYGVTQVMADP---DSPVFAE 61

Query: 69  AKKLGKEDIVAIKGKVVA------NEKAPKG-FEVIPIEIRVLNKADAPLPLDPSEKVSA 121
            +K+  E  + I G V A      N+K P G  EV   +I VL K++  LPL    +   
Sbjct: 62  IEKVRSEWCIRIDGNVKARDESLVNDKIPTGEIEVFIRDIEVLGKSEE-LPLMVFGEQEY 120

Query: 122 EIDTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTEL 181
             +TRL  R+LD+RR K+Q    +RS M++SIR+   D+GF E  TP + AS+ EG  + 
Sbjct: 121 PEETRLRYRYLDLRREKMQKNMLLRSNMIQSIRRRMWDKGFNEYQTPIITASSPEGARDF 180

Query: 182 FPISYFEKEAF--LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSE 239
              S      F  L Q+PQ +KQ+MM  GFDK F+IA  FR E+    R   +   +D E
Sbjct: 181 LVPSRLHPGKFYALPQAPQQFKQLMMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDLE 240

Query: 240 MSFVNEKDAMAMLEKVVYNCYSDIEYNRPNEIELLELNWEIPEKTF 285
           MSFV ++D    ++ V+   + +    R  + E  +++++   K +
Sbjct: 241 MSFVTQQDVFDTIQPVMQGVFEEFGKGRKVDSEWPQVSYKDAAKWY 286



 Score = 58.5 bits (140), Expect = 5e-13
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 353 FDLMYKELEISSGAQRVHKYDLLVQNISNMGLNPDSFET----YLEAFKYGMPPHAGWGL 408
           +DL     E+ SGA R HK +++ +     G   +  E      + AF+YG PPH G   
Sbjct: 478 YDLACNGYELVSGAIRNHKPEIMFKAFEIAGYGKEEVEKRFGGMVNAFQYGAPPHGGCAA 537

Query: 409 GADRFAMVLTAQDNIRECVLFPRDRQ 434
           G DR  M+L  + NIRE ++FP +++
Sbjct: 538 GIDRMVMLLADEANIREVIMFPMNQR 563