Pairwise Alignments

Query, 438 a.a., aspartate--tRNA(Asn) ligase from Methanococcus maripaludis S2

Subject, 592 a.a., aspartyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  140 bits (352), Expect = 1e-37
 Identities = 100/295 (33%), Positives = 154/295 (52%), Gaps = 27/295 (9%)

Query: 9   RTHYSKDVIPEMDGQEVTLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEI 68
           R+HY  DV     G+EVTL+GWV+  R LG + F+ LRDR G IQ V        E F++
Sbjct: 2   RSHYCGDVNRSHVGEEVTLVGWVNRSRDLGGVVFLDLRDREGVIQVVYDPDL--PEVFDV 59

Query: 69  AKKLGKEDIVAIKGKVVA------NEKAPKG-FEVIPIEIRVLNKADAPLPLDPSEKVSA 121
           A  L  E  V +KG V A      N++   G  EV+   + +LN A A LP++  +    
Sbjct: 60  ASTLRSEFCVQVKGLVRARPDSQINDQMRTGEIEVLGKALTILNSAPA-LPINMDKNQHN 118

Query: 122 EIDTRLDKRFLDIRRPKIQAIFKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTE- 180
             + RL  R+LD+RRP++      RS++  ++R+     GF+++ TP L  +  EG  + 
Sbjct: 119 TEEQRLKYRYLDLRRPEMAERIIFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDY 178

Query: 181 LFPISYFEKEAF-LGQSPQLYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSE 239
           L P   ++ + F L QSPQL+KQ++M  GFD+ ++I + FR E+    R   E   ID E
Sbjct: 179 LVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQ-PEFTQIDIE 237

Query: 240 MSFVNEKDAMAMLEKVVYNCYSDIEYNRPNEIELLELNWEIPEKTFDKVTYTEAI 294
            SF+     M   E++V   + ++            LN ++ E  F K+T+ EA+
Sbjct: 238 TSFMTSAQVMDKTEEMVRGLFKEL------------LNVDLGE--FPKMTFAEAM 278



 Score = 59.3 bits (142), Expect = 3e-13
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 349 VCKAFDLMYKELEISSGAQRVHKYDLLVQNISNMGLNPDS----FETYLEAFKYGMPPHA 404
           +  A+D++    E+  G+ R++  ++       +G+N +     F   LEA KYG PPHA
Sbjct: 471 ISDAYDMVLNGCELGGGSVRIYDAEMQSAVFRILGINDEEAQEKFGFLLEALKYGTPPHA 530

Query: 405 GWGLGADRFAMVLTAQDNIRECVLFPRDRQRLTP 438
           G   G DR  M++T   +IR+ + FP+      P
Sbjct: 531 GLAFGLDRMVMLMTGASSIRDVMAFPKTTTAACP 564