Pairwise Alignments

Query, 438 a.a., aspartate--tRNA(Asn) ligase from Methanococcus maripaludis S2

Subject, 527 a.a., lysyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  137 bits (346), Expect = 6e-37
 Identities = 119/440 (27%), Positives = 207/440 (47%), Gaps = 45/440 (10%)

Query: 26  TLMGWVHSIRALGKLAFVILRDRAGTIQAVVPKQKVDEETFEIAKKLGKEDIVAIKGKVV 85
           T+ G + S R+ GK+AF  + DR G +Q    ++++ EE ++  KKL   DIV + G++ 
Sbjct: 92  TMAGRIVSHRSFGKVAFFHIMDRTGRMQCYAAREELGEEAYKTFKKLDIGDIVGVSGRLF 151

Query: 86  ANEKAPKGFEVIPIEIRVLNKADAPLPLDPSEKVSA--EIDTRLDKRFLD-IRRPKIQAI 142
             +           E+R+L K+  PLP    EK     +++ R  +R++D I  P+ + I
Sbjct: 152 RTKTGELTLSCT--EVRLLTKSIRPLP----EKYHGLKDVEIRYRQRYVDLIVTPRARDI 205

Query: 143 FKIRSEMLKSIRKTFADEGFIEVNTPKLVASATEGGTELFPISYF----EKEAFLGQSPQ 198
           F+ R+ +++  R+     GF+EV TP +   A  GG    P   F    + + ++  +P+
Sbjct: 206 FRKRTIIVREFRRFLEARGFMEVETPMM--QAIPGGATAKPFVTFHNALDMQLYMRIAPE 263

Query: 199 LYKQMMMAGGFDKVFEIAQIFRAEEHNTRRHLNEAISIDSEMSFVNEKDAMAMLEKVVYN 258
           LY + ++ GGF+KVFEI + FR E  +T+ H  E    +   ++   +D M + E++  +
Sbjct: 264 LYLKRLLVGGFEKVFEINRNFRNEGISTQ-HNPEFTMCEFYWAYATFEDLMDLTEELFSH 322

Query: 259 -----CYSDIEYNRPNEIELLELNWE--IPEKTFDKV---------TYTEAIDIAIAKGV 302
                C S +   +  E++L    W      ++ +KV          Y +       +G 
Sbjct: 323 IAREVCGSSVITYQGQEVDLTPGKWVRLTFHESLEKVGGHSPEFYNDYEKVRAYVRERGE 382

Query: 303 EIEWGEDLSRAAERA----VGDEMGGLYFITEWPTQTRPFYTLPHKHDNKVCKAFDLMYK 358
           ++  GE L +   +     V   +    FI  +PT   P  +  ++ +  V   F+L   
Sbjct: 383 KVLQGEKLGKLQAKLFDLDVEPRLIQPTFIYHYPTDISPL-SRRNEQNPDVTDRFELFIT 441

Query: 359 ELEISSGA--------QRVHKYDLLVQNISNMGLNPDSFETYLEAFKYGMPPHAGWGLGA 410
             E+++          QR+   D + +  +         E YL A +YGMPP AG G+G 
Sbjct: 442 GRELANAFSELNDPVDQRMRFEDQVKEKEAGDDEAHFMDEDYLRALEYGMPPAAGQGVGI 501

Query: 411 DRFAMVLTAQDNIRECVLFP 430
           DR  M+LT   +IRE +LFP
Sbjct: 502 DRLVMLLTDSPSIREVILFP 521