Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 429 a.a., histidyl-tRNA synthetase from Pseudomonas stutzeri RCH2

 Score =  150 bits (379), Expect = 7e-41
 Identities = 119/423 (28%), Positives = 194/423 (45%), Gaps = 33/423 (7%)

Query: 3   QKPKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTG---DEIRT 59
           Q  +G  D LP +    + +E    ++ DSY +SEI  P  E  +L ++  G   D +  
Sbjct: 6   QAIRGMNDILPAQTPIWRYLESTFAQLLDSYGYSEIRLPILEFTDLFARGIGEGTDVVDK 65

Query: 60  QLFVFRDHGDREMGLRPELTSSVARFYINEFKNTPKPV-KLYYFTNCFRYENPQAGRYRE 118
           +++ F D  +  + LRPE T+   R  +         V KL+Y    FRYE PQ GRYR+
Sbjct: 66  EMYTFLDRNEESLTLRPEGTAGCVRAVLEHGLTGGGQVQKLWYTGPMFRYEKPQKGRYRQ 125

Query: 119 FWQMGSELIGSKKPIADAEVVNMAIEGLKEINMDFEIHIGHLGVLKGVFEKYNLSDDEGN 178
           F Q+G E+     P  DAE++ +     K++ +   + +              L+    +
Sbjct: 126 FHQIGVEVFNQPGPDIDAELIVLTARLWKQLGLASAVTL-------------QLNSLGSS 172

Query: 179 EIRRLIDKEDMDGLKSVLSRLESEKNIEISKKVFEVLDLKGGKEV-----IPILKEKLAD 233
           E R       +  ++    +L+ +    ++     +LD K  +        P L + L D
Sbjct: 173 EARARYRDALVAYMQQRFDQLDEDSQRRLTTNPLRILDSKNAQTQSLLADAPTLHDYLDD 232

Query: 234 FESSVAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAK-QVCGGGRYD 292
              S A  + L + L+ V   Y IN  + RGLDYY   VFE    K GA+  VC GGRYD
Sbjct: 233 --ESRAHFDGLKARLDAVGIAYEINPKLVRGLDYYGRTVFEWVTDKLGAQGTVCAGGRYD 290

Query: 293 NLIELFEGEPSPAVGFAYGFDRIMLNIDDFEVENESIFVVP----VKSSEMLLKECLKIA 348
            LI  F G+P+P VGFA G +R++L ++  E+  +++   P        E      L +A
Sbjct: 291 GLISQFGGKPTPGVGFAMGVERLVLLLETLELVPDALSPAPHAYICAFGEAAELAALALA 350

Query: 349 KTLRDS--GKSVEVDLMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKNM--ETGE 404
           + LRD+  G  + V+  G         A+    +  LI+GE+++    V  K +  ++ +
Sbjct: 351 ERLRDTLPGLRLLVNAGGGSFKSQFKKADKSGARFALILGEDELAGRVVGCKPLRDDSEQ 410

Query: 405 QSL 407
           QS+
Sbjct: 411 QSI 413