Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 477 a.a., Histidyl-tRNA synthetase (EC 6.1.1.21) from Xanthomonas campestris pv. campestris strain 8004

 Score =  147 bits (370), Expect = 9e-40
 Identities = 117/442 (26%), Positives = 199/442 (45%), Gaps = 42/442 (9%)

Query: 5   PKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 64
           P G  + LP E    + +   +R+ ++ + F  + TP FE  ++L  K+G E   Q++  
Sbjct: 7   PPGIMELLPREQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETERQVYFV 66

Query: 65  RDHGDR-----------------EMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFR 107
           +  G                   E+ LR +LT  +AR+          P + Y     +R
Sbjct: 67  QSTGALANAAAAADEGAESGGLPELALRFDLTVPLARYVAEHEHELSFPFRRYQMQRVYR 126

Query: 108 YENPQAGRYREFWQMGSELIGSKKPIA---DAEVVNMAIEGLKEINM-DFEIHIGHLGVL 163
            E  Q GR+REF+Q   ++IG K  ++   DAEV+ +      E+ + DF++ + +  +L
Sbjct: 127 GERAQRGRFREFYQCDIDVIG-KDALSIRYDAEVLAVIHAVFAELGIGDFKVQLNNRKLL 185

Query: 164 KGVFEKYNLSDDEGN-EIRRLIDKEDMDGLKSVLSRLESE----KNIEISK-KVFEVLDL 217
           +G FE   +++ E    + R +DK D  G + V   L  E       ++ K   F  +  
Sbjct: 186 RGFFESLGVAEGELQLAVLREVDKIDKRGAEYVRDTLTGEGFGIATAQVDKILAFVAVRS 245

Query: 218 KGGKEVIPILKEKLADFESSVA---ALENLDSILEFV------PHDYVINFGIARGLDYY 268
            G  + +  L+   A   +S      +  L  +LE V         Y +NF IARGLDYY
Sbjct: 246 NGHADALAQLQALEASVGASATLGEGIAELREVLELVKALGVPETAYCLNFSIARGLDYY 305

Query: 269 TGMVFE-VYGKKEGAKQVCGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNIDD----FE 323
           TG V+E           +C GGRY+NL   +     P VG + G  R+   + +      
Sbjct: 306 TGTVYETTLTDHPQIGSICSGGRYENLASHYTKSKLPGVGISIGLTRLFWQLREAGLIAG 365

Query: 324 VENESIFVVPVKSSEMLLKECLKIAKTLRDSGKSVEVDLMGRKLNKALNYANTKNIKKVL 383
           +   S+  +     E  L + L IA+ LR  G + EV +  +K+ K   YA    I+ V+
Sbjct: 366 IAESSVHAMVALMDESRLDDALDIARRLRIGGINTEVQMEPKKVGKQFQYAARAGIRFVV 425

Query: 384 IVGENDIRDGKVSLKNMETGEQ 405
           + G++++  G V++K++   +Q
Sbjct: 426 LAGDDELARGVVAVKDLVREQQ 447