Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 415 a.a., Histidyl-tRNA synthetase, class IIa (NCBI) from Rhodospirillum rubrum S1H

 Score =  179 bits (455), Expect = 1e-49
 Identities = 135/417 (32%), Positives = 206/417 (49%), Gaps = 26/417 (6%)

Query: 3   QKPKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDE---IRT 59
           Q  +GT D+LP+E +  + +E+  R V + + F EI TP FE  ++ ++  GD    +  
Sbjct: 5   QPVRGTHDYLPDEARSHRHVEETARTVAERFGFGEIITPIFEFTDVFARTLGDTSDVVTK 64

Query: 60  QLFVFRDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREF 119
           +++ F D     + LRPE T+ VAR +I+       PVKL+Y    FR+E PQ GR R+F
Sbjct: 65  EMYTFTDRSGDSLTLRPENTAGVARAFISGGLAQNVPVKLFYRGPMFRHERPQKGRLRQF 124

Query: 120 WQMGSELIGSKKPIADAEVVNMAIEGLKEINMDFEIHIGHLGV-LKGVFEKYNLSDDEGN 178
            Q+G ELIG++ P+AD EV+ +  + L           G LGV  + +    +L D E  
Sbjct: 125 HQVGVELIGAENPLADVEVIALGSQLL-----------GALGVGGRTILHLNSLGDPESR 173

Query: 179 EIRRLIDKEDMDGLKSVLSRLESEKNIEISKKVFEVLDLKG-GKEVIPILKEKLADF--E 235
           E  R      + G +  LSR   E+   + +    VLD K  G   +     +L D   E
Sbjct: 174 EAYRAALVSYLSGHRDSLSRDSLER---LERNPLRVLDSKDEGDRAVVAGAPRLIDHLNE 230

Query: 236 SSVAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAK-QVCGGGRYDNL 294
           +S A    +   LE +   + I+  + RGLDYY    FE      GA+  V  GGRYD L
Sbjct: 231 ASRAFFAGVTGGLEALGIPFEIDPLLVRGLDYYGHTAFEFVTTDLGAQGTVMAGGRYDGL 290

Query: 295 IELFEGEPSPAVGFAYGFDRI-MLNIDDFEVENESIFVVPVKSSEMLLKECLKIAKTLRD 353
           I    G  +P VG+A G +R+ ML   D       + ++P    + +  E LK+A  LR 
Sbjct: 291 IRQMGGSQTPGVGWAAGVERLSMLMAADRVGAPRPLAMIPAGPDDEV--EALKLAHALRQ 348

Query: 354 SGKSVEVDLMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKNMETGEQSLIEL 410
            G  V+    G  L K +  AN  N +  +I+G  +  +G V ++++++GEQ  I L
Sbjct: 349 GGLFVDFGYSG-NLGKRMKRANRINARAAIILGGEERANGTVVVRDLDSGEQETIGL 404