Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 495 a.a., histidyl-tRNA synthetase HisS from Phaeobacter inhibens DSM 17395

 Score =  142 bits (359), Expect = 2e-38
 Identities = 125/447 (27%), Positives = 202/447 (45%), Gaps = 48/447 (10%)

Query: 5   PKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 64
           PKG RD+  EE+ +R  + + +  V+  Y F  + +   E+ E L K   D  R    VF
Sbjct: 15  PKGFRDYFGEEVSQRSEMLQAIAGVYHRYGFDALESSAVETVEALGKFLPDVDRPNEGVF 74

Query: 65  R----DHGDRE--MGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYRE 118
                D G     M LR +LT+ +AR Y     + P P + Y     +R E P  GRYR+
Sbjct: 75  AWQEYDEGGNGDWMALRYDLTAPLARVYAQHRNDLPTPYRRYAMGPVWRNEKPGPGRYRQ 134

Query: 119 FWQMGSELIGSKKPIADAEVVNMAIEGLKEINM---DFEIHIGHLGVLKGVFEKYNL--S 173
           F+Q  ++ +G+    ADAE+  M  + L+ + +   D+ + + +  VL GV E   L   
Sbjct: 135 FYQCDADTVGTASMAADAEICAMLSDTLETVGIPRGDYLVRVNNRKVLNGVLEAMGLEAG 194

Query: 174 DDEGNEIRRLIDKEDMDGLKSVLSRLESEKNIEISKKVFEVLDLKGGK--EVIPILKEKL 231
           D + +++ R IDK D  G ++ +  L ++  ++ S    + + L   +   V+  L  K 
Sbjct: 195 DAKRDDVLRTIDKFDKVG-EAGVRELLTKGRLDASGAFIDGVGLSDDQAAPVLAFLTSKG 253

Query: 232 ADFESSVA-----------------ALENLDSILE---FVPHDYVINFGIARGLDYYTGM 271
           AD   ++A                  LE +  +L    +      I+  + RGL YYTG 
Sbjct: 254 ADAAKTLANLSEAVGSSSIGAEGVGELEQIGDLLAAGGYGADRIDIDPSVVRGLGYYTGP 313

Query: 272 VFEV---------YGKKEGAKQVCGGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNIDD- 321
           V+E           G+K     V GGGRYD+L++ F G+  PA G + G DR++  + + 
Sbjct: 314 VYEAELTFEILDEKGRKRQFGSVSGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALREK 373

Query: 322 --FEVENESIFVVPVKSSEMLLKECLKIAKTLRDSGKSVEVDLMGRK-LNKALNYANTKN 378
              + E     VV V     +      +A+ LR++G   EV L   K     L YA+ +N
Sbjct: 374 GRIKAEATGPVVVTVMDKARMADYQAMVAE-LRNAGIRAEVYLGNPKNFGNQLKYADKRN 432

Query: 379 IKKVLIVGENDIRDGKVSLKNMETGEQ 405
               +I G  +   G V +K++  G Q
Sbjct: 433 SPIAVIEGGEEKDRGVVQIKDLILGAQ 459