Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 362 a.a., putative tRNA synthetase from Phaeobacter inhibens DSM 17395

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 79/354 (22%), Positives = 138/354 (38%), Gaps = 63/354 (17%)

Query: 21  TIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVFRDHGDREMGLRPELTS 80
           ++  +LR  F++     +  P  +  E L    G++IR + +V  D    E  LRP+ T 
Sbjct: 9   SLAARLRMSFEAAGARVVEPPFLQPAETLLDLYGEDIRARAYVTSDALRGEQMLRPDFTV 68

Query: 81  SVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGSELIGSKKPI-ADAEVV 139
            V   ++   ++  +P +  Y  + FR +     R  E+ Q+G E+     P  +DAEV 
Sbjct: 69  PVVEMHM---RDGAEPARYTYAGDVFRRQEHDEDRANEYLQVGYEVFERHDPAGSDAEV- 124

Query: 140 NMAIEGLKEINMDFEIHIGHLGVLKGVFEKYNL--------------------------- 172
             A+  L+  ++      G +G+L    E  N                            
Sbjct: 125 -FALIALQLRDLPVRAATGDIGILMAAVEGLNTTSLRKAALMRHIWRPRRFRAMLDQFAG 183

Query: 173 -SDDEGNEIRRLIDKEDMDGLKSVLSR---LESEKNIE----------ISKKVFEVLD-L 217
            S   G+  + L  +  + G    + +    E +  +E          I++     L+ L
Sbjct: 184 RSPVAGSRRKLLSTEGVLTGQVPAIGKRRPAEVDARVEALRADAAAPPIAENELTALEAL 243

Query: 218 KGGKEVIPILKEKLADFESSV----AALENLDSI--------LEFVPHDYVINFGIARGL 265
              +E IP   E+L D    +     AL+ LD+         ++    D+  ++G    +
Sbjct: 244 MAVRETIPYASEQLRDIAVDLPAINPALDRLDARTAAMKARGIDVDNLDFEASYG-RTSM 302

Query: 266 DYYTGMVFEVYG-KKEGAKQVCGGGRYDNLI-ELFEGEPSPAVGFAYGFDRIML 317
           +YY G VF  Y   +     +  GGRYD L  +L +G   PAVG     D ++L
Sbjct: 303 EYYDGFVFGFYADSRPDLPVIASGGRYDALTRQLGQGAEIPAVGGVVRPDLMLL 356