Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 423 a.a., histidyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (383), Expect = 2e-41
 Identities = 124/418 (29%), Positives = 195/418 (46%), Gaps = 25/418 (5%)

Query: 3   QKPKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTG---DEIRT 59
           Q  +G  D LP +    + +E  LR    +Y +SEI TP  ES +L  +  G   D +  
Sbjct: 6   QAIRGMNDILPTQSPLWQKLEAVLRDTVAAYGYSEIRTPIVESTDLFKRSIGEVTDIVEK 65

Query: 60  QLFVFRDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREF 119
           +++ F D     + LRPE T+S  R          +  +L+Y    FR+E PQ GRYR+F
Sbjct: 66  EMYTFADRNGDLLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKGRYRQF 125

Query: 120 WQMGSELIGSKKPIADAEVVNMAIEGLKEINMDFEIHIGHLGVLKGVFEKYNLSDDEGNE 179
            Q G E+ G      DAEV+ M+    +++ +   + +  L  L    E+    D     
Sbjct: 126 NQFGVEVYGIASADIDAEVLMMSHRLWQKLGISEHVKL-ELNTLGDAQERAAYRDALVEF 184

Query: 180 IRRLIDKEDMDGLKSVLS---RLESEKNIEISKKVFEVLDLKGGKEVIPILKEKLADFES 236
           + +  +K D D  + + S   R+   KN ++   + +           P L + L   E 
Sbjct: 185 LEQHEEKLDEDSQRRMYSNPLRVLDSKNPDVQALLGDA----------PALMDYLG--EE 232

Query: 237 SVAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAK-QVCGGGRYDNLI 295
           S     +L  +LE V   Y IN  + RGLDYY   VFE      GA+  V  GGRYD L+
Sbjct: 233 SRGHFAHLCELLEAVGIQYEINPRLVRGLDYYNRTVFEWVTDSLGAQGTVLAGGRYDGLV 292

Query: 296 ELFEGEPSPAVGFAYGFDRIMLNIDDFEVENESIFVVPVKSSEM---LLKECLKIAKTLR 352
               G+ +PAVGFA G +RI+L ++   + ++    V V  + M        +K+A+ LR
Sbjct: 293 GQLGGKDTPAVGFAMGLERIVLMLETLALTDDVSGPVDVYVTAMGDDCRVAAIKVAQQLR 352

Query: 353 D-SGKSVEVDLMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKNM-ETGEQSLI 408
           +  G  V     G    K +  A+    K  +++GE ++ +G+V+LK + E  EQ L+
Sbjct: 353 EVDGLKVMSHCGGGNFKKQMKRADKSGAKLAIVIGETELANGQVALKYLREEKEQELV 410