Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 417 a.a., histidyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  166 bits (421), Expect = 9e-46
 Identities = 134/419 (31%), Positives = 194/419 (46%), Gaps = 35/419 (8%)

Query: 4   KPKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDE---IRTQ 60
           K KG  D  P E      +E   R+VF  Y F E+ TP  E  +L  +  G E   ++ +
Sbjct: 6   KIKGFADLFPPESDVFTRMESVARQVFGRYGFVELRTPILERTDLFCRSIGTETDVVQKE 65

Query: 61  LFVFRDHGDREMGLRPELTSSVARFYINEFKNTPKPV-KLYYFTNCFRYENPQAGRYREF 119
           ++ F D  DR + +RPE T+ V R YI   ++T +PV KL+     FRYE PQ GR R+F
Sbjct: 66  MYTFPDRKDRSLTMRPEATAGVMRAYIESGRHTQEPVSKLFTSGPMFRYERPQKGRMRQF 125

Query: 120 WQMGSELIGSKKPIADAEVVNMAIEGLKEINM-DFEIHIGHLGVLKGVFEKYNLSDDEGN 178
            Q+  E++G  +P ADAE+V M +  L E+ +    + I  LG                 
Sbjct: 126 HQINCEVLGPVEPHADAELVLMLMRFLTELGLTGLSLQINSLGC---------------K 170

Query: 179 EIRRLIDKEDMDGLKSV-LSRLESEKNIEISKKVFEVLDLK--GGKEVI----PILKEKL 231
           E R L  K   D L S+  + L  +    +      VLD K  G +E+      IL+   
Sbjct: 171 ECRPLYRKALSDFLASIDNAALCEDCRRRMETNPLRVLDCKVPGCRELTANAPTILEHNC 230

Query: 232 ADFESSV-AALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAK-QVCGGG 289
            +  +   A L  LDS    VP  YV+N  + RGLDYY    FEV     G++  V GGG
Sbjct: 231 PECRTHFDAVLRILDS--RNVP--YVLNDRLVRGLDYYNRTTFEVVSDSIGSQGSVAGGG 286

Query: 290 RYDNLIELFEGEPSPAVGFAYGFDRIMLNIDDFEVENESIFVVPVKSSEMLLKECLKIAK 349
           RYD LI    G   P VGFA G +R+ L +   +       V  +  +       L +A+
Sbjct: 287 RYDGLISQLGGPDVPGVGFACGMERLALMMPGADAPRPHFHVAVLDPAAQ--DAALLLAE 344

Query: 350 TLRDSGKSVEVDLMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKNMETGEQSLI 408
            LR  G +  V      +   +  A     +  LI+G +++  G V +K+M++GEQ  I
Sbjct: 345 DLRAQGLTGSVGFGAGSIKSRMRLAGKSGARACLILGGDELAAGTVVVKDMDSGEQETI 403