Pairwise Alignments

Query, 416 a.a., histidine--tRNA ligase from Methanococcus maripaludis S2

Subject, 425 a.a., histidyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  149 bits (375), Expect = 2e-40
 Identities = 117/424 (27%), Positives = 191/424 (45%), Gaps = 43/424 (10%)

Query: 3   QKPKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTG---DEIRT 59
           Q  +G  D LP +    + +E  LR    +Y +SEI TP  E+ +L  +  G   D +  
Sbjct: 6   QAIRGMNDILPTQSPLWQKVEAVLRASVAAYGYSEIRTPIVENTDLFKRSIGEVTDIVEK 65

Query: 60  QLFVFRDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREF 119
           +++ F D     + LRPE T+S  R          +  +L+Y    FR+E PQ GRYR+F
Sbjct: 66  EMYTFEDRNGDSLTLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKGRYRQF 125

Query: 120 WQMGSELIGSKKPIADAEVVNMAIEGLKEINMDFEIHIGHLGVLKGVFEKYNLSDDEGNE 179
            Q G E+ G      DAEV+ ++                       ++EK  +S+    E
Sbjct: 126 HQFGVEVYGIGSADIDAEVLMLSAR---------------------LWEKLGISEHVTLE 164

Query: 180 IRRLIDKEDMDGLKSVL--------SRLESEKNIEISKKVFEVLDLKGGKEVIPILKEK- 230
           +  L D  +    +  L         +L+ +    +      VLD K   +V  IL +  
Sbjct: 165 LNTLGDPAERAAYREALIAFLEQHKDKLDEDSQRRMYSNPLRVLDSKD-PQVQSILADAP 223

Query: 231 -LADF--ESSVAALENLDSILEFVPHDYVINFGIARGLDYYTGMVFEVYGKKEGAK-QVC 286
            L D+  E S      L  +L+ V   Y +N  + RGLDYY   VFE      G++  V 
Sbjct: 224 ALMDYLGEESSQHFAQLRELLDAVGIQYRVNPRLVRGLDYYNRTVFEWVTNSLGSQGTVL 283

Query: 287 GGGRYDNLIELFEGEPSPAVGFAYGFDRIMLNIDDFEVENE---SIFVVPVKSSEMLLKE 343
            GGRYD L+    G+ +PAVGFA G +RI+L ++  E+  +   ++ V      +  L E
Sbjct: 284 AGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLELTQDIPAAVDVYVAAMGDSCLVE 343

Query: 344 CLKIAKTLRDSGKSVEV--DLMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKNME 401
            +K+A+ LR +  ++ V     G    K +  A+    +  L++GE ++ +G V++K + 
Sbjct: 344 AIKVAQELRSTLPTLRVMSHCGGGNFKKQIKRADKSGAQVALLIGEEELAEGVVTVKYLR 403

Query: 402 TGEQ 405
              +
Sbjct: 404 NDNE 407