Pairwise Alignments

Query, 388 a.a., methanogenesis marker 16 metalloprotein from Methanococcus maripaludis S2

Subject, 482 a.a., putative hydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 8/74 (10%)

Query: 298 NRCRVCDSCEAQKMCPTNAIVRLDHLGKRTLPNENCFGCGVCVDSCTYGVYQMDRKSIMG 357
           N CR C +      CP +AI R    G+  + ++ C  CG+C  SC Y        +I+ 
Sbjct: 111 NLCRGCVARSCYMNCPKDAI-RFKKNGQAMIDHDTCVSCGICHKSCPY-------HAIVY 162

Query: 358 IPITCRQSDRVRAL 371
           IP+ C +S  V+A+
Sbjct: 163 IPVPCEESCPVKAI 176



 Score = 32.0 bits (71), Expect = 4e-05
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 309 QKMCPTNAIVRLDHLGKRTLPNENCFGCGVCVDSCTYG 346
           ++ CP  AI + +H G   +    C  CG C+++C +G
Sbjct: 168 EESCPVKAISKDEH-GVEHIDESKCIYCGKCMNACPFG 204