Pairwise Alignments

Query, 268 a.a., RimK family alpha-L-glutamate ligase from Methanococcus maripaludis S2

Subject, 488 a.a., ribosomal protein S6 modification protein-related protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 20/190 (10%)

Query: 72  VINSAETIQTCQNKYFT---YLKLKKVSPKSFLTYSKDISEIFDKIDNNFGYPFVVKPIY 128
           VI+   +I  C NK +    + K +  +PKS L +  + +  F++I    G PF++K   
Sbjct: 270 VIDDPLSIIRCTNKVYLKELFEKERIPAPKSTLIFQSNENS-FEQISEQVGAPFILKIPD 328

Query: 129 GGYGDGVLKVNSKSEFIE----VFEKNEKNELFVQEFVPYIHDIRVFLLNN-EIIGSMER 183
           G Y  G+ KV+++ E       +FEK+    L  Q F P   D RV LLN   +      
Sbjct: 329 GSYSIGMKKVSNEEELKTSLELLFEKSAI--LLAQAFTPTEFDWRVGLLNGVPLYACKYY 386

Query: 184 IPKNSWK--ANYSLGAE-------IREFKLSNEVEDMVLDSVKKLGADVVGIDVLISKDK 234
           + K  W+   +Y  G         I  +++   V D  + +   +G  + G+D+ +  DK
Sbjct: 387 MAKGHWQIYCHYDSGRSRCGLVDTIPIYQVPRVVLDTAIKAANLIGKGLYGVDLKMVDDK 446

Query: 235 NYILEANITP 244
            Y++E N  P
Sbjct: 447 AYVIEINDNP 456