Pairwise Alignments

Query, 221 a.a., TrkA family potassium uptake protein from Methanococcus maripaludis S2

Subject, 457 a.a., K+ transport systems, NAD-binding component from Pseudomonas stutzeri RCH2

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 63/212 (29%), Positives = 114/212 (53%), Gaps = 9/212 (4%)

Query: 1   MYIIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEEVAGEIDALVINGDCTKTKSLEN 60
           M II+ G G+VG +LA+ L+ + +D+ ++D + +   ++   +D   I G  +    L  
Sbjct: 1   MKIIILGAGQVGGTLAEHLASEANDITVVDTDGERLRDLGDRLDIRTIQGRGSFPTVLRQ 60

Query: 61  AGIEDADIFIAVTGNQEINLISGLIA-KKFNVSKTIARVSEPDY---KDVF--ESLGIGV 114
           AG +DAD+ +AVT + E N+++  +A   F+    IARV E  Y     +F  E++ + V
Sbjct: 61  AGADDADMLVAVTNSDETNMVACQVAYTLFHTPTKIARVRESAYLVHSGLFNNEAIPVDV 120

Query: 115 VISPELVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELG---GTK 171
           +ISPE V  NYI++LI+ PG + +     G A+++ +       +  +++R+L       
Sbjct: 121 LISPEQVVTNYIKRLIEHPGSLQVIDFAGGKAQLVAVRAYYGGPLVGQELRQLRRHMPNV 180

Query: 172 DYVIIAIYEGNELKIPDGSTELKAYDRILILA 203
           D  + AI+  N   +P G T ++A D +  +A
Sbjct: 181 DTRVAAIFRRNHAILPQGDTVIEADDEVFFIA 212



 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 57/220 (25%), Positives = 114/220 (51%), Gaps = 6/220 (2%)

Query: 3   IIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEEVAGEIDA-LVINGDCTKTKSLENA 61
           I++AG G +G  LA+++  + + + I++ N   C  ++  +D+ +++ G  +    L   
Sbjct: 234 IVIAGGGHIGERLAEAIESR-YQVKIIEMNPARCRYLSDTLDSTIILQGSASDRDLLVEE 292

Query: 62  GIEDADIFIAVTGNQEINLISGLIAKKFNVSKTIARVSEPDYKDVFESLGIGVVISPELV 121
            I +AD+F+A+T + E N++S L+AK+    K +  ++ P Y D+ +   I + ISP+L 
Sbjct: 293 NINEADVFLALTNDDEANIMSSLLAKRLGARKVMCIINNPAYVDLVQGGEIDIAISPQLA 352

Query: 122 AANYIEKLIDRPGVVDLAIVGRGDAEILELII---PPTSKVADKKIRELGGTKDYVIIAI 178
               +   + R  +V    + RG AE +E+I    P +SKV  + I ++       I A+
Sbjct: 353 TIGTLLTHVRRGDIVSAHSLRRGAAEAIEVIAHGDPRSSKVVGRAIEQIALPPGTTIGAV 412

Query: 179 YEGNELKIPDGSTELKAYDR-ILILAKTDSLDEVRKVFSS 217
              +++ I    T +++ D  IL L     + +V ++F +
Sbjct: 413 IRDDQVLIAHDDTRIESGDHVILFLVDKKHIRDVERLFQA 452