Pairwise Alignments

Query, 221 a.a., TrkA family potassium uptake protein from Methanococcus maripaludis S2

Subject, 341 a.a., potassium channel protein from Synechococcus elongatus PCC 7942

 Score = 70.5 bits (171), Expect = 4e-17
 Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 13/226 (5%)

Query: 2   YIIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEE-VAGEIDALVINGDCTKTKSLEN 60
           + I+ G GR G  +A+  + +    V+LD ++   +  +A  + A V  GD T  + L  
Sbjct: 118 HYIICGFGRTGQEIAREFNAEALPFVVLDNDESAIDTAIAAGLQAFV--GDATLDEVLIK 175

Query: 61  AGIEDADIFIAVTGNQEINLISGLIAKKFNVS-KTIARVSEPDYKDVFESLGIGVVISPE 119
           AGIE A   +A   +   NL + L AK  N + +TIAR S  +        G   V+SP 
Sbjct: 176 AGIERARCLVAAMPSDADNLYAILSAKTLNPNLRTIARASSAEAVQKLRRGGADAVVSPY 235

Query: 120 LVAANYIEKLIDRPGVV----DLAIVGRGDAEILELII-PPTSKVADKKIRE--LGGTKD 172
           +     +     RP V+    DL         I E ++  P S+   + +RE  L G   
Sbjct: 236 ITGGRRMAAAARRPQVIDFIDDLTSASERSVYIDEFLLEQPRSRFIGRTLREADLRGRSG 295

Query: 173 YVIIAI--YEGNELKIPDGSTELKAYDRILILAKTDSLDEVRKVFS 216
            +I+AI   +G  L  P G T L+  D +L L     L  + K+ +
Sbjct: 296 ALILAIRRADGTLLASPTGDTYLELGDLLLCLGTGPQLQALEKLLA 341