Pairwise Alignments

Query, 221 a.a., TrkA family potassium uptake protein from Methanococcus maripaludis S2

Subject, 458 a.a., trk system potassium uptake protein TrkA from Phaeobacter inhibens DSM 17395

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 11/231 (4%)

Query: 1   MYIIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEEVAGEIDALVINGDCTKTKSLEN 60
           M +I+ G G+VG  +A+ LSG+ +D+ ++D N          +D   I G  +    L  
Sbjct: 1   MKVIICGAGQVGWQIARHLSGEHNDVTVVDNNPDLVRRATDTLDVQGIAGFASYPDVLTR 60

Query: 61  AGIEDADIFIAVTGNQEINLISGLIAKK-FNVSKTIARVS-----EPDYKDVF--ESLGI 112
           AG  DAD+ IA T + E+N+++  +A   F++ + IAR+      E  Y D++  + L I
Sbjct: 61  AGARDADMIIAATHSDEVNMVTCQVAHSVFSIQRKIARLRSKSYLEAIYSDLYRRDHLPI 120

Query: 113 GVVISPELVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELG---G 169
            VVISPE   A    + +  P   D  +   G A++L + I     V +  +R+L     
Sbjct: 121 DVVISPEREVAAAAMQRLSAPAAFDTEMFMEGGAQLLGVQIDEDCPVVNTPLRQLTDLFS 180

Query: 170 TKDYVIIAIYEGNELKIPDGSTELKAYDRILILAKTDSLDEVRKVFSSENK 220
           T   +++ I     L  P+   +L   D   + A  + +    +VF  + K
Sbjct: 181 TLRAIVVGIRRDGSLFAPEPGDQLFVGDSAYVFAHVEDVSRTIEVFGKQQK 231



 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 55/215 (25%), Positives = 110/215 (51%), Gaps = 3/215 (1%)

Query: 3   IIVAGMGRVGISLAKSLSGK-GHDLV-ILDQNKKTCEEVAGEID-ALVINGDCTKTKSLE 59
           +++ G G VG+ +AK+L  + G     ++++N+K  E  A  ++  +V+NGD      + 
Sbjct: 236 VVIVGGGNVGLEVAKALESRTGRTRAKMIERNRKCAERAAETLERTIVLNGDGLDRSLMI 295

Query: 60  NAGIEDADIFIAVTGNQEINLISGLIAKKFNVSKTIARVSEPDYKDVFESLGIGVVISPE 119
            AGI+ AD  +AVT + ++N+++ + AK       IA +++P    +   LGI   I+P 
Sbjct: 296 EAGIDRADAMLAVTDDDKVNMLAAVRAKAEGCPLAIALINDPTLVPLMAPLGIDAYINPR 355

Query: 120 LVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELGGTKDYVIIAIY 179
               + I + I    V  +  +G  +AE++E  +  TS +A + IR++   +  ++ A+ 
Sbjct: 356 ATTVSSILRHIRYGRVRQVYSIGDAEAEVIEAEVMSTSPMAGQMIRDIDFPEGVLVGAVS 415

Query: 180 EGNELKIPDGSTELKAYDRILILAKTDSLDEVRKV 214
           +   +  P G   ++  D I + A    + EV ++
Sbjct: 416 KNGVVMRPTGGMRIEEGDVIALFAMAADVPEVERL 450