Pairwise Alignments

Query, 221 a.a., TrkA family potassium uptake protein from Methanococcus maripaludis S2

Subject, 335 a.a., potassium channel protein from Methanococcus maripaludis JJ

 Score = 59.7 bits (143), Expect = 7e-14
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 13/221 (5%)

Query: 2   YIIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCE-EVAGEIDALVINGDCTKTKSLEN 60
           + IV G GR+G  +   L   G D V +D N +  E E   + +   I GD T  + L +
Sbjct: 109 HYIVCGYGRIGRVVIDRLRESGLDYVAIDSNSEILEAEFEKDPNFNYIVGDATHDEYLID 168

Query: 61  AGIEDADIFIAVTGNQEINLISGLIAKKFNVS-KTIARVSEPDYKDVFESLGIGVVISPE 119
           A I+ A   I+       N+   L +K+ N     +++  E    D     G   V+SP 
Sbjct: 169 AQIDRAKALISTVSTDSDNVYITLSSKRLNPKLYVVSKADEQVAMDKLLIAGADKVVSPY 228

Query: 120 LVAANYIEKLIDRPGVVDLAIVGRG--------DAEILELIIPPTSKVADKKIRE--LGG 169
           ++    + +L  +PG++D               D EI +++I   SK+  K + E  +  
Sbjct: 229 MIGGLRVAELAMKPGILDFVSTFMSIAKYEYDEDLEIRKILIGKNSKIRGKTLTESQIRY 288

Query: 170 TKDYVIIAIYEGNELKIPDGSTELKAY-DRILILAKTDSLD 209
                II I + N+L +  G   +  Y D+I      + LD
Sbjct: 289 NSRVTIIGIKKENDLLVNPGPEIILEYNDQIYAFGTGEQLD 329