Pairwise Alignments

Query, 221 a.a., TrkA family potassium uptake protein from Methanococcus maripaludis S2

Subject, 469 a.a., potassium uptake protein TrkA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 87.8 bits (216), Expect = 3e-22
 Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 6/218 (2%)

Query: 3   IIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEEVAGEID-ALVINGDCTKTKSLENA 61
           I++AG G +G+ LAK L  + H + +++   +  E ++ +++   V  GD +  + L   
Sbjct: 246 IMIAGGGNIGLGLAKRLE-RTHSVKLIEHKFERAEALSEQLENTTVFCGDASDQELLLEE 304

Query: 62  GIEDADIFIAVTGNQEINLISGLIAKKFNVSKTIARVSEPDYKDVFESLGIGVVISPELV 121
            I+  D+FIAVT + E N++S L+AK+    K +  +    Y D+ +   I + ISP+  
Sbjct: 305 HIDQTDVFIAVTNDDEANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQA 364

Query: 122 AANYIEKLIDRPGVVDLAIVGRGDAEILELII---PPTSKVADKKIRELGGTKDYVIIAI 178
             + +   I +  + ++  + RG AE +E I      TSKV  K I ++       I AI
Sbjct: 365 TISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSSTSKVVGKAIGDIKLPPGTTIGAI 424

Query: 179 YEGNELKIPDGSTELKAYDR-ILILAKTDSLDEVRKVF 215
               E+ +    T ++  D  +L L     + EV K+F
Sbjct: 425 VRNEEVLMAHDKTVIEQGDHVVLFLVNKKFIGEVEKLF 462



 Score = 83.2 bits (204), Expect = 8e-21
 Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 24/241 (9%)

Query: 1   MYIIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEEVAGEIDALVINGDCTKTKSLEN 60
           M II+ G G+VG +LA++L G+ +D+ I+D +K     +  + D  V+ G       L+ 
Sbjct: 1   MKIIILGAGQVGGTLAENLVGENNDITIVDSDKSRLRALQDKYDLRVVAGHGAHPNVLKE 60

Query: 61  AGIEDADIFIAVTGNQEINLISGLIA-KKFNVSKTIARVSEPDYKDVFESLGIG------ 113
           AG EDAD+ IAVT + E N+++  +A   F     IAR+    Y  + + L I       
Sbjct: 61  AGAEDADMLIAVTNSDECNMVACQMAYSLFGTPTKIARIRSEPYLAMRDKLFINSETKNS 120

Query: 114 -----------VVISPELVAANYIEKLIDRPGVVDLAIVGRGDAEILELII---PPTSKV 159
                       +I+PE +   YIE+L++ PG + +     G   ++ +      P    
Sbjct: 121 DGRPRGGFVIDELIAPEQLVTAYIERLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN 180

Query: 160 ADKKIRELGGTKDYVIIAIYEGNELKIPDGSTELKAYDRILILAKTDSLDEVRKVFSSEN 219
           A   +RE     D  + AI+      +P G+T ++A D +  +A +     +R V S   
Sbjct: 181 ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADS---RHIRAVMSEMQ 237

Query: 220 K 220
           K
Sbjct: 238 K 238