Pairwise Alignments

Query, 221 a.a., TrkA family potassium uptake protein from Methanococcus maripaludis S2

Subject, 458 a.a., TrkA-N domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 11/232 (4%)

Query: 1   MYIIVAGMGRVGISLAKSLSGKGHDLVILDQNKKTCEEVAGEIDALVINGDCTKTKSLEN 60
           M +I+ G G+VG  +A+ L+G+ +D+ ++D N +        +D   I G  +    L +
Sbjct: 1   MKVIICGAGQVGWQIARHLAGERNDVTVVDNNPELVRRATDTLDVQGITGFASYPDVLTS 60

Query: 61  AGIEDADIFIAVTGNQEINLISGLIAKK-FNVSKTIARVSEPD-----YKDVF--ESLGI 112
           AG  DAD+ IA T + E+N++   I+   F + + IAR+         Y D++  + L I
Sbjct: 61  AGANDADMIIAATFSDEVNMVICQISHSIFEIPRKIARLRSQSYLTAIYSDLYRRDHLPI 120

Query: 113 GVVISPELVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELG---G 169
            VVISPE   A    K +  P   D      G A +L + +     V    +R+L     
Sbjct: 121 DVVISPEREVAEAALKRLAAPAAFDTEKFLGGKATLLGISLDADCPVLSTPLRQLTDLFS 180

Query: 170 TKDYVIIAIYEGNELKIPDGSTELKAYDRILILAKTDSLDEVRKVFSSENKE 221
           T   +++ +     L +PD   +L A D+I I  K D LD   +VF    ++
Sbjct: 181 TLHAMVVGVRRKGTLFVPDPGDQLFAGDQIYIFCKDDDLDRTLEVFGKTTRK 232



 Score = 83.2 bits (204), Expect = 8e-21
 Identities = 51/215 (23%), Positives = 112/215 (52%), Gaps = 3/215 (1%)

Query: 3   IIVAGMGRVGISLAKSLSGKGHDL--VILDQNKKTCEEVAGEID-ALVINGDCTKTKSLE 59
           I++ G G VG+++A++L  +   +   ++++++K  E  A  ++  +V+NGD      L 
Sbjct: 236 IVLIGGGNVGLTVARTLESRESRVRVKVIERDRKRAEIAADALERTIVLNGDGLNVDLLR 295

Query: 60  NAGIEDADIFIAVTGNQEINLISGLIAKKFNVSKTIARVSEPDYKDVFESLGIGVVISPE 119
            A IE AD  +A+T + + NL++ + AK       I+ V++P    +   L I   I+P 
Sbjct: 296 EANIERADAVLAITDDDKTNLLAAVRAKSEGCPVAISLVNDPTLVPLLGPLNIDAYINPR 355

Query: 120 LVAANYIEKLIDRPGVVDLAIVGRGDAEILELIIPPTSKVADKKIRELGGTKDYVIIAIY 179
               + I + +    V  +  +G  +AE++E  +  TS ++ + +R++G  +  ++  + 
Sbjct: 356 ATTVSSILRHVRHGRVRTVYSIGNAEAEVIEAQVLSTSPLSGQVVRDVGFPEGVLLAGML 415

Query: 180 EGNELKIPDGSTELKAYDRILILAKTDSLDEVRKV 214
           +  ++  P GST ++    I++ A  + + EV ++
Sbjct: 416 KDGKVIRPTGSTRIEEGAVIVMFALAEDVPEVERL 450