Pairwise Alignments

Query, 358 a.a., tryptophan--tRNA ligase from Methanococcus maripaludis S2

Subject, 404 a.a., tryptophanyl-tRNA synthetase from Pseudomonas stutzeri RCH2

 Score = 59.7 bits (143), Expect = 1e-13
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 19/170 (11%)

Query: 65  VVSGMMPSGKMHFGHKMVVDQLLYYQKYGADIYIPIADLEAYWARGMDFETTKKLA--IE 122
           VVSGM PSG++H GH   V +     ++  + +  I D  A      D+E + +++  I 
Sbjct: 10  VVSGMRPSGRLHLGHYNGVLKNWVKLQHEYECFFCIVDWHALTT---DYENSGEISQNIM 66

Query: 123 EYITNYIALGLDPEKIHVYLQSKNETVKDLAMRLS--------KRV-NFTEMKGIYGFSG 173
           +   +++A G+ P    +++QS+     +L + LS        +RV ++ E++       
Sbjct: 67  DMAVDWLAAGVSPSSATLFIQSQVPEHAELHLLLSMISPLGWLERVPSYKELQQNLQHKD 126

Query: 174 ETNIGHVFAPVVQVADILHPQLEKKVPVVVPVGIDQDPHIRLTRDIAGRY 223
               G +  P++Q ADIL  +       +VPVG DQ PHI   RD+A R+
Sbjct: 127 LDTYGFLGYPLLQAADILIYRAG-----LVPVGADQLPHIEFARDVARRF 171



 Score = 41.6 bits (96), Expect = 4e-08
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 239 ITGLLGGKMSSSKPETAIYLSDEPTKSFKKKVMSCKTGGRETLEEQKKLGGVPEECVVYE 298
           I+GL GGKM+ S    AIYL D P +  ++K+    T   +     +   G P  C V++
Sbjct: 262 ISGLDGGKMAKSN-SNAIYLRDTPNE-IEEKIRRMPT---DPARVHRSDPGEPTRCPVWQ 316

Query: 299 LYTYHLIEDDKELKKLYDQCKSGELTCGTCKKECYQKLVEFMTDLQEK 346
           ++  H  +D  +  +    C+S  + C  CK      +   +  LQE+
Sbjct: 317 MHLVHSAQDVCQWAE--QGCRSAGIGCLECKAPLIDSIKSDLAPLQER 362