Pairwise Alignments

Query, 358 a.a., tryptophan--tRNA ligase from Methanococcus maripaludis S2

Subject, 342 a.a., tryptophanyl-tRNA synthetase TrpS from Phaeobacter inhibens DSM 17395

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 71/260 (27%), Positives = 108/260 (41%), Gaps = 37/260 (14%)

Query: 65  VVSGMMPSGKMHFGHKM-VVDQLLYYQKYGADIYIPIADLEAY--WARGMDFETTKKLAI 121
           V SG+ PSG +H G+ +  + + + +Q    +    + D+ A   W    D     K + 
Sbjct: 10  VFSGIQPSGNLHLGNYLGALKRFVDWQAKDVESIYCMVDMHAITVWQDPADL----KKST 65

Query: 122 EEYITNYIALGLDPEKIHVYLQSKNETVKDLAM------RLSKRVNFTEMKGIYGFSGET 175
            E    +IA GLDPE+  +  QS+      LA       R+      T+ K   G + + 
Sbjct: 66  RELCAGFIAAGLDPEQSILINQSQVPEHAQLAWIFNCVARMGWMQRMTQWKDKAGKNAQN 125

Query: 176 NIGHVFA-PVVQVADILHPQLEKKVPVVVPVGIDQDPHIRLTRDIAGRYK-----DF--- 226
               +FA P +  ADIL           VPVG DQ  H+ LTRDIA ++      DF   
Sbjct: 126 ASLGLFAYPALMAADILVYHATH-----VPVGEDQKQHLELTRDIAMKFNHDYGVDFFPV 180

Query: 227 --KFIAPSSTYHRFITGLLGGKMSSSKPETA----IYLSDEPTKSFKKKVMSCKTGGRET 280
               I  ++T    +  L  G    SK + +    I L+D+   +  KK+   KT     
Sbjct: 181 TEPVIEGAATR---VMSLRDGSKKMSKSDASDASRINLTDD-ADTIAKKIRKAKTDPDAL 236

Query: 281 LEEQKKLGGVPEECVVYELY 300
             E + L G PE   +  +Y
Sbjct: 237 PSEVEGLEGRPEARNLVNIY 256