Pairwise Alignments

Query, 358 a.a., tryptophan--tRNA ligase from Methanococcus maripaludis S2

Subject, 329 a.a., tryptophanyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 95/304 (31%), Positives = 139/304 (45%), Gaps = 35/304 (11%)

Query: 62  DFTVVSGMMPSGKMHFGHKMVVDQLLYYQKYGADIYIPIADLEAYWARGMDFETTKKLAI 121
           D   VSGM P+G +H GH   V +     ++  + +  +AD  A  +   D    ++  +
Sbjct: 5   DKRTVSGMRPTGPLHLGHYFGVLKNWVEMQHEMEAFFFVADWHALTSDYADPSRIREF-V 63

Query: 122 EEYITNYIALGLDPEKIHVYLQSKNETVKDLAMRLS---------KRVNFTEMKGIYGFS 172
            E +T+++A GLDPEK  ++ QS  +   +L + LS         +   + E K      
Sbjct: 64  PELVTDWVAAGLDPEKCVMFQQSHIKEHAELHLILSMITPVSWLERNPTYKEQKQEVVNK 123

Query: 173 GETNIGHVFAPVVQVADIL--HPQLEKKVPVVVPVGIDQDPHIRLTRDIAGR----YKDF 226
              N G +  PV+  +DIL  HP+        VPVG DQ PH+ LTR+IA R    Y D+
Sbjct: 124 DLGNYGFLGYPVLMASDILIYHPKW-------VPVGQDQLPHLELTREIARRFNFLYGDY 176

Query: 227 KFIAPSS--TYHRFITGLLGGKMSSSKPETAIYLSDEPTKSFKKKVMSCKTGGRETLEEQ 284
            F  P +  T      GL G KMS S    AIYL D   +    KV    T   +T   +
Sbjct: 177 -FPEPEARLTPAAKCPGLDGRKMSKSY-GNAIYLRD-TMEEIAPKVRGMFT---DTNRLR 230

Query: 285 KKLGGVPEECVVYELYTYH-LIEDDKELKKLYDQCKSGELTCGTCKKECYQKLVEFMTDL 343
           K   G P+ C    L+ YH L+   ++  ++   C S  L C  CKK   + L  F+  L
Sbjct: 231 KSDPGNPDVC---NLFPYHELMASPEQQAEIRQGCTSASLGCVDCKKIFLENLGAFLGPL 287

Query: 344 QEKR 347
            E+R
Sbjct: 288 HERR 291