Pairwise Alignments

Query, 358 a.a., tryptophan--tRNA ligase from Methanococcus maripaludis S2

Subject, 329 a.a., tryptophanyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 33/299 (11%)

Query: 66  VSGMMPSGKMHFGHKMVVDQLLYYQKYGADIYIPIADLEAYWARGMDFETTKKLA--IEE 123
           VSGM P+G +H GH   V +     ++  + Y  +AD  A  +   DF    ++   + E
Sbjct: 9   VSGMRPTGPLHLGHYFGVLKNWVEMQHEMEAYFFVADWHALTS---DFAEPSRIKEFVPE 65

Query: 124 YITNYIALGLDPEKIHVYLQSKNETVKDLAMRLSK--RVNFTEMKGIYGFSGET------ 175
            + +++A GLDPEK  ++ QS+ +   +L + LS    V++ E    Y    +       
Sbjct: 66  LVKDWVAAGLDPEKCVIFQQSQVKEHAELHLILSMITPVSWLERNPTYKEQQQEITTKDL 125

Query: 176 -NIGHVFAPVVQVADILHPQLEKKVPVVVPVGIDQDPHIRLTRDIAGRYKDFK---FIAP 231
            N G +  PV+  +DIL  +     P  VPVG DQ PH+ LTR+I  R+  F    F  P
Sbjct: 126 GNYGFLGYPVLMASDILIYR-----PKWVPVGQDQLPHLELTREIGRRFNHFYGDFFPEP 180

Query: 232 SS--TYHRFITGLLGGKMSSSKPETAIYLSDEPTKSFKKKVMSCKTGGRETLEEQKKLGG 289
            +  T      GL G KMS S     IYL D   +    KV    T   +    +K   G
Sbjct: 181 EARLTPAAKCPGLDGRKMSKSY-GNGIYLRD-TIEEVAPKVRGMFT---DPARLRKSDPG 235

Query: 290 VPEECVVYELYTYHLIEDDKELK-KLYDQCKSGELTCGTCKKECYQKLVEFMTDLQEKR 347
            P+ C    L+ YH++  D E + ++ + C S +L C  CKK   + L  F   L E+R
Sbjct: 236 NPDVC---NLFPYHVLMTDAEKQAEIREGCTSAKLGCVDCKKMFLESLARFFEPLHERR 291