Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 382 a.a., carbamoyl-phosphate synthase, small subunit from Pseudomonas stutzeri RCH2

 Score =  268 bits (686), Expect = 1e-76
 Identities = 150/376 (39%), Positives = 215/376 (57%), Gaps = 33/376 (8%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           IL L DG+I RGE  GA+ + +GE+VFNT+MTGY EILTDPSY  QI+T+TYP  GN G 
Sbjct: 10  ILALADGSIFRGESIGADGQTIGEVVFNTAMTGYQEILTDPSYAKQIVTLTYPHVGNTGT 69

Query: 64  EKEWFESDGIKAEGFVVKDIT--------GKELDEFLKEYNIPGISGVDTRYITRKIRSK 115
             E  ES  + A G V++D+          + L ++LK      I+G+DTR +TR +R K
Sbjct: 70  TPEDAESWKVWAAGLVIRDLPLISSNWRDKQPLPDYLKANGTVAIAGIDTRRLTRILREK 129

Query: 116 GVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIYN---------- 165
           G     +   ++  T+++  EL +    +P +  +DL  EVS KE   +           
Sbjct: 130 GAQNGCILAGSDA-TEEKALELARS---FPGLKGMDLAKEVSVKERYEWRSSVWCLKDDG 185

Query: 166 -----AEDEKTRCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNG 220
                A +     V  D GVK +I+  LV RGC V  +P  +   E ++ NPD + ++NG
Sbjct: 186 HAEIPASELPYHVVAFDYGVKYNILRMLVARGCRVTVLPAQTPASEALALNPDGIFLANG 245

Query: 221 PGDPENMSETVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVE 279
           PGDPE     ++ ++ ++   +PV GICLGHQ++ +A G KT K+  GH G N PV+D++
Sbjct: 246 PGDPEPCDYAIKAIQEVLETDIPVFGICLGHQLLALASGAKTVKMPNGHHGANHPVQDLK 305

Query: 280 SGKVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEA 339
           +G V ITSQNHGFA D+  +PA     H +L D T++GI + + +      +S Q HPEA
Sbjct: 306 TGVVMITSQNHGFAVDEASLPANVRATHKSLFDGTLQGIERTDKA-----AFSFQGHPEA 360

Query: 340 GPGPHDARFLFDEMVE 355
            PGPHD   LFD  +E
Sbjct: 361 SPGPHDVAPLFDRFIE 376