Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 379 a.a., carbamoyl-phosphate synthase small subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  293 bits (751), Expect = 4e-84
 Identities = 164/383 (42%), Positives = 224/383 (58%), Gaps = 33/383 (8%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           +LVLEDGT+ RG   GA+   +GE+VFNTSMTGY EILTDPSY  QI+T+TYP  GN G 
Sbjct: 6   LLVLEDGTVFRGVSIGADGISVGEVVFNTSMTGYQEILTDPSYSQQIVTLTYPHIGNTGT 65

Query: 64  EKEWFESDGIKAEGFVVKDI--------TGKELDEFLKEYNIPGISGVDTRYITRKIRSK 115
             E  ES  I A+G V++D+        + + L ++LK  NI GI+ +DTR +TR +R K
Sbjct: 66  NSEDEESTAIHAQGLVIRDLPLIASNFRSEQSLSDYLKSQNIVGIADIDTRKLTRILREK 125

Query: 116 GVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIYN---------- 165
           G     +    N     +E   L K  ++P +  +DL   VSTKE   +           
Sbjct: 126 GAQNGCIMAGDNL----DEALALAKAKEFPGLKGMDLAKVVSTKEAYAWKQGSWTLEGGL 181

Query: 166 ----AEDEKT-RCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNG 220
               A+ E     V  D G K++I+  LV+RGC +  VP  +  E++++ NPD V +SNG
Sbjct: 182 PEAKADSELPYHVVAYDFGAKRNILRMLVDRGCRLTVVPAQTSAEDVLALNPDGVFLSNG 241

Query: 221 PGDPENMSETVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVE 279
           PGDPE  +  +E  +  +   +PV GICLGHQI+ +A G KT K+KFGH G N PVKD++
Sbjct: 242 PGDPEPCTYAIEATRVFLEKNIPVFGICLGHQILALASGAKTVKMKFGHHGANHPVKDLD 301

Query: 280 SGKVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEA 339
            G V ITSQNHGFA D+  +P      H +L D +++GI + +        +S Q HPEA
Sbjct: 302 RGVVMITSQNHGFAADEATLPDNLRATHKSLFDGSLQGIHRTD-----KPAFSFQGHPEA 356

Query: 340 GPGPHDARFLFDEMVELGIKFKA 362
            PGPHDA  LFD  +EL  +F+A
Sbjct: 357 SPGPHDAAPLFDHFIELIKQFRA 379