Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 391 a.a., carbamoyl phosphate synthase small subunit from Synechococcus elongatus PCC 7942

 Score =  266 bits (679), Expect = 9e-76
 Identities = 157/374 (41%), Positives = 217/374 (58%), Gaps = 33/374 (8%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           +LVL DG++  G   GA   V+GE+VFNT MTGY E+LTDPSY GQI++ TYP  GN GV
Sbjct: 20  LLVLADGSVFHGYACGAAGTVIGEVVFNTGMTGYQEVLTDPSYCGQIVSFTYPELGNTGV 79

Query: 64  EKEWFESDGIKAEGFVVKDI--------TGKELDEFLKEYNIPGISGVDTRYITRKIRSK 115
             E  ES   +  G + +++          + L ++L+++NI GI G+DTR +T+ +RS 
Sbjct: 80  NPEDEESARPQVSGLIARNVARRHSNWRADRSLPDYLQQHNIVGIYGIDTRALTQHLRST 139

Query: 116 GVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKE------------TVI 163
           G +   + T     T  +  EL  +V   P +  ++LV +V+T                I
Sbjct: 140 GAMNGGIST-----TILDPEELWAEVKAAPSMEGLNLVDQVTTDRPYEWQTPTSQTWEFI 194

Query: 164 YNAEDEKTRCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNGPGD 223
                E    V ID GVK++I+  L   GC V+ VP ++  EEI+ + PD V +SNGPGD
Sbjct: 195 EGPTTESLTVVAIDFGVKRNILRRLASYGCRVIVVPADTPIEEILRHEPDGVFLSNGPGD 254

Query: 224 PENMSETVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVESGK 282
           P  +   + T + L+   LP+ GICLGHQI+ +ALG +T+KLKFGHRG N P     S +
Sbjct: 255 PATVKNGISTAQALLQTGLPLFGICLGHQILGLALGAQTFKLKFGHRGLNHPCG--LSQQ 312

Query: 283 VYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEAGPG 342
           V ITSQNHGFA     +    E+ H+NLND TV G+R          V+SVQYHPEA PG
Sbjct: 313 VEITSQNHGFAIAADSLGPDVEVTHLNLNDRTVAGLRHRHL-----PVFSVQYHPEASPG 367

Query: 343 PHDARFLFDEMVEL 356
           PHD+ +LF++ V L
Sbjct: 368 PHDSDYLFEQFVAL 381