Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 389 a.a., Carbamoyl-phosphate synthase, small subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  259 bits (662), Expect = 9e-74
 Identities = 155/375 (41%), Positives = 214/375 (57%), Gaps = 29/375 (7%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           +L L DGT+  G G GA  EV+GE+ FNT+MTGY E++TDPSY GQI+T  +P  GN G 
Sbjct: 16  VLALADGTLFWGRGVGALGEVVGEVCFNTAMTGYQEVMTDPSYAGQIVTFCFPHIGNVGT 75

Query: 64  EKEWFESDGIKAEGFVVK-DITGKE-------LDEFLKEYNIPGISGVDTRYITRKIRSK 115
             E  ES    A G V++ DIT          L+ +L    + GISGVDTR +TR+IR  
Sbjct: 76  NAEDIESTVPAARGCVLRADITEPANWRATGALNGWLAARGLVGISGVDTRQLTRRIRDL 135

Query: 116 GVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIYNA--------- 166
           G    ++  + + +   +   L+ K   +P +  +DL  EV+  +T  ++          
Sbjct: 136 GAPSGVIAHAADGVF--DIPALVAKAQGWPGLEGMDLAAEVTCTQTYAWDETLWSLDGGY 193

Query: 167 ---EDEKTRCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNGPGD 223
               D +   V ID G K++I+  L   GC V  VP  +  +E++++ PD + +SNGPGD
Sbjct: 194 GRLSDPRFHVVAIDYGAKRNILRNLASLGCKVTVVPAQTTLDEVMAHQPDGIFLSNGPGD 253

Query: 224 PENMSE-TVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVESG 281
           P       V  +K LI    P+ GICLGHQ++ +ALG  TYK+  GHRG N PVKD  +G
Sbjct: 254 PAATGTYAVPVIKQLIETGKPLFGICLGHQMLALALGATTYKMATGHRGANHPVKDHTTG 313

Query: 282 KVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEAGP 341
           KV ITS NHGFA D   +PAG    H +L D+ +EG+    + D K  V+SVQYHPEA P
Sbjct: 314 KVEITSMNHGFAVDRASLPAGVTETHTSLFDNVLEGL----AVDGK-PVFSVQYHPEASP 368

Query: 342 GPHDARFLFDEMVEL 356
           GP D+ +LF   V+L
Sbjct: 369 GPEDSHYLFKRFVDL 383