Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 387 a.a., carbamoyl-phosphate synthase small chain from Phaeobacter inhibens DSM 17395

 Score =  258 bits (660), Expect = 1e-73
 Identities = 155/374 (41%), Positives = 215/374 (57%), Gaps = 30/374 (8%)

Query: 5   LVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGVE 64
           L L DGTI  G GFGA  E + EL FNT+MTGY EI+TDPSY GQI+T T+P  GN GV 
Sbjct: 13  LALADGTIFYGNGFGAYGETVAELCFNTAMTGYQEIMTDPSYAGQIVTFTFPHIGNTGVT 72

Query: 65  KEWFESDGIKAEGFVVK-DIT-------GKELDEFLKEYNIPGISGVDTRYITRKIRSKG 116
            E  E+    A G VVK D T        +EL ++L   N   I G+DTR +TR IR  G
Sbjct: 73  PEDDETADPVAAGMVVKWDPTLASNWRATEELKDWLTRTNRIAIGGIDTRRLTRAIRQLG 132

Query: 117 VIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIYNA---------- 166
                L  + +P    +   L+ K  ++  +  +DL  +V+  ++  ++           
Sbjct: 133 APHVAL--AHDPDGNFDIEALVAKAREWSGLEGLDLAKDVTCSQSYRWDEMRWAWPEGYT 190

Query: 167 --EDEKTRCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNGPGDP 224
             E  K + V ID G K++I+ CL   GC V  +P ++  EE+++++PD V +SNGPGDP
Sbjct: 191 RQEAPKHKVVAIDYGAKRNILRCLASAGCDVTVLPASATAEEVLAHSPDGVFLSNGPGDP 250

Query: 225 ENMSE-TVETVKNLIGM--LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVESG 281
               E  V  ++ ++    LP+ GICLGHQ++ +ALGGKT K+  GH G N PVK+  +G
Sbjct: 251 AATGEYAVPMIQQILDTTDLPMFGICLGHQMLALALGGKTVKMNHGHHGANHPVKENATG 310

Query: 282 KVYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEAGP 341
           KV ITS NHGFA D + +P G E  H++L D +  GIR  +       V+SVQ+HPEA P
Sbjct: 311 KVEITSMNHGFAVDGQSLPDGVEETHVSLFDGSNCGIRISD-----RPVYSVQHHPEASP 365

Query: 342 GPHDARFLFDEMVE 355
           GP D+ +LF+   E
Sbjct: 366 GPQDSFYLFERFAE 379