Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 198 a.a., aminodeoxychorismate/anthranilate synthase component II from Methanococcus maripaludis JJ

 Score = 56.2 bits (134), Expect = 7e-13
 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 16/153 (10%)

Query: 194 SVVKVPYNSKKEEIISYNPDFVLVSNGPGDPENMSETVETVKNLIGML--PVTGICLGHQ 251
           SV  VP     +E+   NPD +++S GPG PEN  + VE    +I  +  PV G+CLGHQ
Sbjct: 24  SVKVVPNTISIDELKKLNPDGIIISPGPGAPENKRD-VENCPEIIKTMDVPVLGVCLGHQ 82

Query: 252 IITIALGGKTYKLKFGHRGGNQPVKDVES-----GKVYITSQNHGFATDDKIVPAGSELM 306
            I    GGK  ++   H   +    D +         +   + H  +    +    +  +
Sbjct: 83  TIAHIFGGKVGRIPPVHGKSSSVTHDSKGIFKNVKNPFTAGRYHSLSV---LKVPENFTV 139

Query: 307 HMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEA 339
               +D TV GIR  +       +  VQ+HPE+
Sbjct: 140 TATTDDGTVMGIRHNDM-----PIEGVQFHPES 167