Pairwise Alignments

Query, 366 a.a., glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit from Methanococcus maripaludis S2

Subject, 376 a.a., carbamoyl-phosphate synthase small chain from Marinobacter adhaerens HP15

 Score =  285 bits (728), Expect = 2e-81
 Identities = 156/374 (41%), Positives = 219/374 (58%), Gaps = 30/374 (8%)

Query: 4   ILVLEDGTIIRGEGFGAETEVLGELVFNTSMTGYVEILTDPSYKGQIITMTYPLEGNYGV 63
           IL L DG++  G   GA+ E  GE+VFNT+MTGY EILTDPSY  QI+T+TYP  GN GV
Sbjct: 6   ILALADGSLFYGTAIGADGETSGEVVFNTAMTGYQEILTDPSYSRQIVTLTYPHIGNTGV 65

Query: 64  EKEWFESDGIKAEGFVVKDI--------TGKELDEFLKEYNIPGISGVDTRYITRKIRSK 115
            +E  ESD I+A G +++D+        +   LD++L+  NI GI+ +DTR +TR +R K
Sbjct: 66  NEEDVESDRIQAAGLIIRDLPLLASSWRSKGTLDDYLRSNNIVGIADIDTRRLTRILRDK 125

Query: 116 GVIRSLLKTSTNPITKDEETELLKKVVDYPDISEIDLVPEVSTKETVIYNA--------- 166
           G     +    N  T +   EL K    +P +  +DL  EV++ +T  +           
Sbjct: 126 GSQNGAIVAGENA-TAERALELAKA---FPGLKGMDLAKEVTSDKTWSWKETEWTLEEGY 181

Query: 167 ---EDEKTRCVLIDCGVKQSIVDCLVERGCSVVKVPYNSKKEEIISYNPDFVLVSNGPGD 223
              E+ + + V  D GVK +I+  L  RGC +  VP  +   E+++ NPD V +SNGPGD
Sbjct: 182 GEREESRFKVVAWDYGVKLNILRMLASRGCDITVVPAQTPASEVLAMNPDGVFLSNGPGD 241

Query: 224 PENMSETVETVKNLIGM-LPVTGICLGHQIITIALGGKTYKLKFGHRGGNQPVKDVESGK 282
           PE     +  +K ++   +PV GICLGHQ++ +A G KT K+  GH G N PV+++ +G 
Sbjct: 242 PEPCDYAITAIKEVLETEIPVFGICLGHQLLALASGAKTMKMGHGHHGANHPVQEIATGT 301

Query: 283 VYITSQNHGFATDDKIVPAGSELMHMNLNDDTVEGIRKLESSDLKNTVWSVQYHPEAGPG 342
           V ITSQNHGFA D+  +PA  E  H +L D T++GIR+ +        +S Q HPEA PG
Sbjct: 302 VMITSQNHGFAVDEATLPANVEATHKSLFDGTLQGIRRTD-----KPAYSFQGHPEASPG 356

Query: 343 PHDARFLFDEMVEL 356
           PHD   LFDE + L
Sbjct: 357 PHDVAPLFDEFIRL 370