Pairwise Alignments

Query, 633 a.a., IGHMBP2 family helicase from Methanococcus maripaludis S2

Subject, 2208 a.a., DNA helicase from Pseudomonas fluorescens FW300-N2C3

 Score = 58.9 bits (141), Expect = 2e-12
 Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 66/275 (24%)

Query: 380  FDIAVIDEGSQSTEPSSLIPIVRSRKLIIAGDHKQLPPTVLSD-----------ELELKK 428
            FD+ + DE SQ     ++  + R +++++ GD KQLPPT   +           E +L+ 
Sbjct: 1554 FDLVIFDEASQIPVWDAIGAMARGKQVVMVGDPKQLPPTSFFNRAESTAEDEDVEADLES 1613

Query: 429  TLFERMIQEHPEFSKILQVQYR-MNEKIMEFSNEMFYENKLIAHESVKSQNLLEIVENVS 487
             L E +    P   + L   YR  +E ++ FSN+ +Y++KL+   S              
Sbjct: 1614 ILDECISANLP--MRNLSWHYRSRHESLIAFSNQRYYQSKLVTFPS-------------- 1657

Query: 488  NEDKDIINEKPLQFINVDGEEKQNSFKSSYNVEEAEKVLEIVSKLQ-----KYEIPVSVI 542
                    +K ++   V G   +   +++  +E    V ++V++LQ     +    V V+
Sbjct: 1658 ----PFTADKAVRLCPVPGIYDKGGSRTNL-IEARYLVADLVARLQSPAFRESRRTVGVV 1712

Query: 543  TPYDAQVKYISKMLN-----------------TDKIDVKSVDGFQGRENEVIVISFVRTS 585
            T    Q K I  ML+                  + + VK+++  QG E ++I  S     
Sbjct: 1713 TFNGEQQKLIMDMLDEACRKDPSLDSYFAESELEPVFVKNLESVQGDERDIIYFSTTYGK 1772

Query: 586  KMGFLKDL-----------KRLNVAVTRAKRKLIV 609
                +  +           +RLNVA+TRA+++L+V
Sbjct: 1773 DAAGVLSMNFGPMNRPGGERRLNVAITRARQELVV 1807



 Score = 41.2 bits (95), Expect = 5e-07
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 1/88 (1%)

Query: 176 QKEAVLEALAARDLYLIHGPPGTGKTSTISEVILQEALRKNKVIATADSNIAVDNILSNI 235
           Q  AV+ A   +D  LI GPPGTGK+ TIS +I Q   +  +V+  ++   A+D +   +
Sbjct: 694 QLAAVMAAAKGKDFVLI-GPPGTGKSQTISNMIAQSIAQGRRVLFVSEKIAALDVVYRRL 752

Query: 236 SKHESFKIVRIGHPSRISKKLIKYSLQT 263
            +    +     H S+  K  +   LQ+
Sbjct: 753 REIGLGEFCLELHSSKARKTDVLAQLQS 780