Pairwise Alignments

Query, 540 a.a., tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 from Methanococcus maripaludis S2

Subject, 330 a.a., putative radical SAM protein (RefSeq) from Shewanella loihica PV-4

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 9/170 (5%)

Query: 193 LEKAQEKNETAKHRCVALTLETRPDYCNEKEINEMLKLGTTR-----VELGIQSTNDEVL 247
           L K +     A    V L + TRPD C   E+  +L     R     +ELG+QS N E L
Sbjct: 116 LLKQRYDEAVADSDIVGLCVGTRPD-CVSDEVIALLAGYQARGLEVWLELGLQSANLETL 174

Query: 248 EFVKRGHGTDASIKATQLLKDSGLKVSYHLIPGLPKTTPEMDKETIKTVFENPNFKPDLI 307
           + + RGHG +         + +GLKV  HLI GLP  + E    + + V +      D +
Sbjct: 175 KRINRGHGFEEYRDTVIRARKAGLKVCTHLILGLPGESHEDFLASHRAVLD---AGVDGL 231

Query: 308 KFYPCLVIPGTEVYELWQSGEFNPMTDEQAVEVITYGKSIMPKWIRTSRI 357
           K +P  ++ G+ + + W++G  + +T E   E +     + PK +   R+
Sbjct: 232 KIHPLHIVEGSTMAKAWRAGRMSLLTQEAYAESVGELIRLTPKEVIFHRV 281