Pairwise Alignments

Query, 540 a.a., tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 from Methanococcus maripaludis S2

Subject, 309 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 60.8 bits (146), Expect = 7e-14
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 9/133 (6%)

Query: 208 VALTLETRPDYCNEKEINEML-----KLGTTRVELGIQSTNDEVLEFVKRGHGTDASIKA 262
           V L + TRPD C    + ++L     K     +ELG+Q+ ND+ L  + RGH        
Sbjct: 117 VGLCVGTRPD-CVPDNVLDLLASYQHKGVDVWLELGLQTANDKTLHHINRGHNFACYCDT 175

Query: 263 TQLLKDSGLKVSYHLIPGLPKTTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYE 322
               +  GLKV  HLI GLP  TP     T++ V        D +K +P  V+ G+ + +
Sbjct: 176 VSRARSRGLKVCTHLILGLPGETPLDYMATLQAVLAQ---GVDGLKLHPLHVVEGSTMAK 232

Query: 323 LWQSGEFNPMTDE 335
           +W++G    +T E
Sbjct: 233 VWRAGRLPLLTME 245