Pairwise Alignments

Query, 540 a.a., tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 from Methanococcus maripaludis S2

Subject, 340 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 93.6 bits (231), Expect = 1e-23
 Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 43/265 (16%)

Query: 96  CPHGKCSFCPGGKESNFGDVPQSYTGKEPATMRGVMYNFDPYVQTSERISQLEKVGHPTD 155
           CP  +C FC             + TG+    +  V+   D  ++        E+  H   
Sbjct: 25  CPQ-RCVFC----------AQDAQTGQSVEPVADVLRRVDAILE--------ERARHNRP 65

Query: 156 KVELIIMGGTFPARDIEYQENFIKRCLDAMNGEVSETLEKAQEKNETAKHRCVALTLETR 215
            VE+   GGTF A   + Q      CL             A       +   VA+   TR
Sbjct: 66  AVEIAFYGGTFSALPEDDQH----ACL-------------ALAARWRERGMVVAVRCSTR 108

Query: 216 PDYCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRG-HGTDASIKATQLLKDSGLKVS 274
           PD     +   +  LG   +ELG+Q+ +D  L    RG HG DA + A + ++D+GL + 
Sbjct: 109 PDALPPGKAEALAGLGMNLIELGVQTFDDTALAHAGRGCHGDDA-LTAARRVRDAGLGLG 167

Query: 275 YHLIPGLPKTTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYELWQSGEFNPMTD 334
             L+PG+P  TP++ +  +K V    + +PD ++ YPCLV+ GT +  LW+ G + P   
Sbjct: 168 LQLLPGMPGVTPDIFRADMKVV---ASLRPDCLRLYPCLVLEGTGLARLWREGRYGPWDV 224

Query: 335 EQAVEVITYGKSIMPKWIRTSRIQR 359
           +  ++V+    +++  W +  R+ R
Sbjct: 225 DTTLDVL--ADALLLAWGQGIRVIR 247