Pairwise Alignments

Query, 540 a.a., tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 from Methanococcus maripaludis S2

Subject, 385 a.a., putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) from Shewanella sp. ANA-3

 Score = 43.5 bits (101), Expect = 1e-08
 Identities = 48/222 (21%), Positives = 83/222 (37%), Gaps = 41/222 (18%)

Query: 100 KCSFCPGGKESNFGDVPQSYTGKEPATMRGVMYNFDPYVQTSERISQLEKVGHPTD--KV 157
           KC +C        G++PQ                   YV T   ++ L +  H     K+
Sbjct: 26  KCPYCDFNSHGQNGELPQK-----------------AYVDTL--LADLRQDLHLVQGRKL 66

Query: 158 ELIIMGGTFPARDIEYQENFIKRCLDAMNGEVSETLEKAQEKNETAKHRCVALTLETRPD 217
             I +GG  P+    +  N IKR LD  N  +  + +             + +T+E  P 
Sbjct: 67  HTIFIGGGTPSL---FDANQIKRILDGANALIPFSDD-------------IEITMEANPG 110

Query: 218 YCNEKEINEMLKLGTTRVELGIQSTNDEVLEFVKRGHGTDASIKATQLLKDSG-LKVSYH 276
                + +     G TR+ +G+QS + + L  + R H  + +  A Q    +G L  +  
Sbjct: 111 TLEHDDFSAYRAAGVTRLSIGVQSFSKDKLNLLGRIHDQNEAQTAAQKASQAGYLSFNLD 170

Query: 277 LIPGLPKTTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGT 318
           L+ GLP    +   E +  +       P  + +Y   + P T
Sbjct: 171 LMHGLPN---QSFAEAMADIDTAAALNPPHLSWYQLTIEPNT 209