Pairwise Alignments

Query, 311 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 319 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 64/298 (21%), Positives = 141/298 (47%), Gaps = 11/298 (3%)

Query: 18  VRISVVVLLTIYIVNYFVNRGLLEKISDYASPVTKKLNLNSFLVSSILVSFFSPTVGYTM 77
           VR+   + L + + N   +      ++  A+P+ +  +L     +S  ++FFS     ++
Sbjct: 16  VRLLSSLSLGLLVANVIESLNWTRGVARLAAPLVQLGHLRDVAGASFSLAFFSSVASNSL 75

Query: 78  LADGITEKELTQTEVLAGTLANSFPAVFSHVLTYYIPVVIPILGYTGIIYVILRLSIAFI 137
           LA+     +L++ E++   L NS PA  +H+ T +  +   +LG+  ++YV L L+ A +
Sbjct: 76  LAESYERGDLSRRELMFANLFNSLPAYLTHLPTLFF-MTWTVLGWPAVVYVGLTLAAAAM 134

Query: 138 KSMLGLF---ILLIISRKNTGNIKSSGNKINNKISPFEKTFKFARRFVPVMF---ISMFL 191
           +++L L    ++L    +     +   +   ++ +  ++ ++  RR  P +    I  ++
Sbjct: 135 RTVLTLLCGRVMLPPLPEGCVTCRLDEHGEVSRGTALQRAWRMFRRRFPRLLLFTIPTYV 194

Query: 192 VLYLSKT--GFFDVFSRIVMPVTNIFNLNPNT-GILAITEIINVSAAMVMAGTFLNEASL 248
           V+Y+ +   GF      +   V  +  L P   GI+ +       AA+  A   LN  +L
Sbjct: 195 VMYMLQITGGFASAQDWLAEHVHWLGFLRPEALGIVVLHLAAEFGAALSAASAVLNTGAL 254

Query: 249 TQNEVLIGLIFGNIVAFSTRSVKHSIPLHFSLFGSKMGTKVIILNSGVTIILDILIIG 306
           ++ E+++ L+ GN+++   R+ +H  P +   F   +   +++ N  V   L I+ +G
Sbjct: 255 SEREIVLALLVGNVLSTPMRAFRHQFPAYAGYFKPALALNLVLANQ-VLRALSIICVG 311