Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 269 a.a., Deoxyribonuclease TatD from Pseudomonas fluorescens FW300-N1B4

 Score = 76.3 bits (186), Expect = 6e-19
 Identities = 63/240 (26%), Positives = 120/240 (50%), Gaps = 28/240 (11%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG-----IYV 62
           ID   ++ + S     + ++ RA+   V Q+V +GT++    +A+EL ++       ++ 
Sbjct: 4   IDIGVNLTNPSFADKHQAVLDRAYAAGVCQLVLTGTSVEGSEQALELCQQLDESAQRLFA 63

Query: 63  TLGYHPGRV---NADDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENIER--QENIFKKF 117
           T G HP      NAD  + +++ + +  KE  ++AVGE GLDF+ +   R  QE + +K 
Sbjct: 64  TAGIHPHSASDWNAD--SAQRLRSLL--KEPNVVAVGECGLDFNRDFSPRPQQEKVLEKH 119

Query: 118 INLSKEVNKPVVIHARGMEERSYDILKN--DVI--SMYHCYSGSLELAKELIKNGNFISY 173
           + ++ E+  PV +H R   +R  +IL++  D +  ++ HC++G  +     +     I  
Sbjct: 120 LEMAVELQLPVFLHERDASQRLLEILRDYRDQLPAAVVHCFTGEKKALFSYLDLDLHIGI 179

Query: 174 STLVCFSE---HHKNLVKNLGLENVVVETDSPYLSP------IKGEKNEPKNVINVIETI 224
           +  +C      H   LVK +    +++E+D+PYL P       K  +NEP  +  V+  +
Sbjct: 180 TGWICDERRGTHLHPLVKEIKRGRLMLESDAPYLLPRSLRPKPKNGRNEPAYLTEVLREV 239