Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 268 a.a., Deoxyribonuclease TatD from Xanthomonas campestris pv. campestris strain 8004

 Score = 76.3 bits (186), Expect = 6e-19
 Identities = 59/240 (24%), Positives = 120/240 (50%), Gaps = 22/240 (9%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKYG--IYVTLG 65
           ID   ++   S ++ R+ +++RA +  V Q+V +G +      A++L +++   +Y T G
Sbjct: 4   IDIGANLTHDSFDRDRDAVLQRARDAGVAQLVITGASREHSPLALQLAQQHPGFLYATAG 63

Query: 66  YHPGRVNADDNAIEKVYNFIRSKEKEILAVGEIGLDFDAENIER--QENIFKKFINLSKE 123
            HP          E+    +++ + +++AVGE GLD+  +   R  Q   F++ + L+ +
Sbjct: 64  VHPHHAVEFTAECEREMRALQA-QPQVVAVGECGLDYYRDFAPRPAQHKAFERQLQLAAD 122

Query: 124 VNKPVVIHARGMEERSYDILK----NDVISMYHCYSGSLELAKELIKNGNFISYSTLVCF 179
             KP+ +H R   +    I++        ++ HC++G+ E   + +    +I  +  +C 
Sbjct: 123 NGKPLFLHQRDAHDDFLSIMRAFDGRLGAAVVHCFTGTREELFDYLDRDYYIGITGWLCD 182

Query: 180 SE---HHKNLVKNLGLENVVVETDSPYLSP------IKGEKNEPKNVINVIETIWELKKD 230
                H + LV+N+    +++ETD+PYL P       K  +NEP  + +++E   EL +D
Sbjct: 183 ERRGAHLRELVRNIPANRLMIETDAPYLLPRTLKPLPKERRNEPMFLSHIVE---ELARD 239