Pairwise Alignments

Query, 251 a.a., YchF/TatD family DNA exonuclease from Methanococcus maripaludis S2

Subject, 259 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  107 bits (267), Expect = 2e-28
 Identities = 73/255 (28%), Positives = 136/255 (53%), Gaps = 18/255 (7%)

Query: 9   IDSHCHVEDKSLNKYREDIVKRAFEKKV-QMVTSGTNLGSCRRAVELKEKY-GIYVTLGY 66
           ID+HCH++       R+ I++RA +  V QMVT  T +      + + E+Y  ++ ++G 
Sbjct: 3   IDTHCHLDFPDFEAERDAIIERARDAGVGQMVTISTRVKRFDTILAIAERYPNVFCSVGT 62

Query: 67  HPGRVNADDNAIEKVYNFIR-SKEKEILAVGEIGLDFDAENIERQENI--FKKFINLSKE 123
           HP   NAD+       + +R S   +++A+GE GLD+  +N  R       ++ I  ++ 
Sbjct: 63  HPH--NADEELDVTADDLVRLSAHPKVVAIGEAGLDYFYDNAPRDAQAVGLRRHIAAART 120

Query: 124 VNKPVVIHARGMEERSYDIL-----KNDVISMYHCYSGSLELAKELIKNGNFISYSTLVC 178
              P+VIH+R  ++    IL     K     + HC+S   +LA+  ++ G ++S+S ++ 
Sbjct: 121 TGLPLVIHSRSADDDMAAILTEESGKGAFPFLLHCFSSGPDLARIGVELGGYVSFSGILT 180

Query: 179 F--SEHHKNLVKNLGLENVVVETDSPYLS--PIKGEKNEPKNVINVIETIWELKKDEYSM 234
           F  SE  +++ + +  + ++VETD+PYL+  P +G++NEP  V +  E +   +    S 
Sbjct: 181 FPKSEELRDIARTVPRDRMIVETDAPYLAPKPFRGKRNEPAYVAHTAEVL--AQAIGVSR 238

Query: 235 DEITKIIYNNTKRLY 249
           +EI +I   N  R++
Sbjct: 239 EEIAEITTENAFRIF 253